Browse dbCAN-PUL Entries

PULID
Characterization Method(s)
Substrate
Organism
Publication
Publish Date
Type
Num Genes
Num CAZymes
CazyFamily
PUL0160 mass spectrometry, sequence homology analysis alpha-mannan Salegentibacter sp. Hel_I_6 30246424
Alpha- and beta-mannan utilization by marine Bacteroidetes. Environ Microbiol. 2018 Nov;20(11):4127-4140. doi: 10.1111/1462-2920.14414. Epub 2018 Oct 16.
2018 Nov degradation 35 12 AA3, CBM32, GH125, GH2, GH43_34, GH76, GH92
PUL0161 mass spectrometry, sequence homology analysis, gene deletion mutant and growth assay, microarray, qPCR alpha-mannan Bacteroides thetaiotaomicron 30246424, 25567280, 18996345
Alpha- and beta-mannan utilization by marine Bacteroidetes. Human gut Bacteroidetes can utilize yeast mannan through a selfish mechanism. Mucosal glycan foraging enhances fitness and transmission of a saccharolytic human gut bacterial symbiont. Environ Microbiol. 2018 Nov;20(11):4127-4140. doi: 10.1111/1462-2920.14414. Epub 2018 Oct 16. Nature. 2015 Jan 8;517(7533):165-169. doi: 10.1038/nature13995. Cell Host Microbe. 2008 Nov 13;4(5):447-57. doi: 10.1016/j.chom.2008.09.007.
2018 Nov,2015 Jan 8,2008 Nov 13 degradation 26 6 GH125, GH67, GH76, GH92, GH97
PUL0163 mass spectrometry, sequence homology analysis, microarray, qPCR alpha-mannan Bacteroides thetaiotaomicron 30246424, 18996345
Alpha- and beta-mannan utilization by marine Bacteroidetes. Mucosal glycan foraging enhances fitness and transmission of a saccharolytic human gut bacterial symbiont. Environ Microbiol. 2018 Nov;20(11):4127-4140. doi: 10.1111/1462-2920.14414. Epub 2018 Oct 16. Cell Host Microbe. 2008 Nov 13;4(5):447-57. doi: 10.1016/j.chom.2008.09.007.
2018 Nov,2008 Nov 13 degradation 21 9 GH125, GH130_3, GH38, CBM32, GH76, GH92, GT32
PUL0194 enzyme activity assay, gene deletion mutant and growth assay host glycan Streptococcus pneumoniae 28056108
Molecular Characterization of N-glycan Degradation and Transport in Streptococcus pneumoniae and Its Contribution to Virulence. PLoS Pathog. 2017 Jan 5;13(1):e1006090. doi: 10.1371/journal.ppat.1006090. eCollection 2017 Jan.
2017 Jan degradation 6 5 GH125, GH20, GH29, GH38, GH92
PUL0211 enzyme activity assay, gene deletion mutant and growth assay, thin-layer chromatography host glycan Xanthomonas campestris pv. campestris 25586188, 25205095
The N-Glycan cluster from Xanthomonas campestris pv. campestris: a toolbox for sequential plant N-glycan processing. The plant pathogen Xanthomonas campestris pv. campestris exploits N-acetylglucosamine during infection. J Biol Chem. 2015 Mar 6;290(10):6022-36. doi: 10.1074/jbc.M114.624593. Epub 2015 Jan 13. mBio. 2014 Sep 9;5(5):e01527-14. doi: 10.1128/mBio.01527-14.
2015 Mar 6,2014 Sep 9 degradation 9 8 GH125, GH18, GH2, GH20, GH29, GH3, GH35, GH92
PUL0478 growth assay alpha-mannan Flavobacterium johnsoniae 19717629
Novel features of the polysaccharide-digesting gliding bacterium Flavobacterium johnsoniae as revealed by genome sequence analysis. Appl Environ Microbiol. 2009 Nov;75(21):6864-75. doi: 10.1128/AEM.01495-09. Epub 2009 Aug 28.
2009 Nov degradation 8 4 GH125, GH2, GH92
PUL0574 enzyme activity assay alpha-mannan Streptococcus pyogenes 16822234
Functional analysis of a group A streptococcal glycoside hydrolase Spy1600 from family 84 reveals it is a beta-N-acetylglucosaminidase and not a hyaluronidase. Biochem J. 2006 Oct 15;399(2):241-7. doi: 10.1042/BJ20060307.
2006 Oct 15 degradation 8 4 GH1, GH125, GH38, GH84
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