PUL ID |
PUL0160 |
PubMed |
30246424, Environ Microbiol. 2018 Nov;20(11):4127-4140. doi: 10.1111/1462-2920.14414. Epub 2018 Oct 16. |
Characterization method |
mass spectrometry,sequence homology analysis |
Genomic accession number |
NZ_JQNQ01000001.1 |
Nucelotide position range |
1815119-1861584 |
Substrate |
alpha-mannan |
Loci |
FG27_RS08030-FG27_RS08170 |
Species |
Salegentibacter sp. Hel_I_6/1250278 |
Degradation or Biosynthesis |
degradation |
Gene Name |
Locus Tag |
Protein ID |
Gene Position |
GenBank Contig Range |
EC Number |
- | FG27_RS08030 | WP_037317819.1 | 0 - 927 (-) | NZ_JQNQ01000001.1:1815119-1816046 | 5.3.1.- |
- | FG27_RS08035 | WP_037317821.1 | 1109 - 2423 (-) | NZ_JQNQ01000001.1:1816228-1817542 | - |
- | FG27_RS08040 | WP_081912606.1 | 2426 - 4796 (-) | NZ_JQNQ01000001.1:1817545-1819915 | 3.2.1.- |
- | FG27_RS08045 | WP_037317824.1 | 4837 - 7132 (-) | NZ_JQNQ01000001.1:1819956-1822251 | 3.2.1.- |
- | FG27_RS08050 | WP_037317827.1 | 7143 - 8169 (-) | NZ_JQNQ01000001.1:1822262-1823288 | - |
- | FG27_RS08055 | WP_037317830.1 | 8184 - 8883 (-) | NZ_JQNQ01000001.1:1823303-1824002 | 1.-.-.- |
- | FG27_RS08060 | WP_037317834.1 | 8894 - 10622 (-) | NZ_JQNQ01000001.1:1824013-1825741 | 1.-.-.- |
- | FG27_RS08065 | WP_037317837.1 | 10639 - 11764 (-) | NZ_JQNQ01000001.1:1825758-1826883 | - |
- | FG27_RS08070 | WP_037317840.1 | 11805 - 13239 (-) | NZ_JQNQ01000001.1:1826924-1828358 | 3.2.1.163 |
- | FG27_RS08075 | WP_037317843.1 | 13309 - 13984 (-) | NZ_JQNQ01000001.1:1828428-1829103 | - |
- | FG27_RS08080 | WP_037317846.1 | 14317 - 15118 (-) | NZ_JQNQ01000001.1:1829436-1830237 | - |
- | FG27_RS08085 | WP_037317849.1 | 15132 - 16749 (-) | NZ_JQNQ01000001.1:1830251-1831868 | - |
- | FG27_RS08090 | WP_081912607.1 | 16761 - 19824 (-) | NZ_JQNQ01000001.1:1831880-1834943 | - |
- | FG27_RS08095 | WP_037317855.1 | 19943 - 22241 (-) | NZ_JQNQ01000001.1:1835062-1837360 | 3.2.1.- |
- | FG27_RS08100 | WP_037317858.1 | 22167 - 23112 (-) | NZ_JQNQ01000001.1:1837286-1838231 | - |
- | FG27_RS08105 | WP_081912656.1 | 23291 - 25379 (+) | NZ_JQNQ01000001.1:1838410-1840498 | - |
- | FG27_RS08110 | WP_051935788.1 | 25375 - 26605 (+) | NZ_JQNQ01000001.1:1840494-1841724 | - |
- | FG27_RS08115 | WP_037317860.1 | 26949 - 28428 (+) | NZ_JQNQ01000001.1:1842068-1843547 | - |
- | FG27_RS08120 | WP_037317862.1 | 28474 - 29302 (+) | NZ_JQNQ01000001.1:1843593-1844421 | - |
- | FG27_RS19385 | WP_231563298.1 | 29402 - 29633 (+) | NZ_JQNQ01000001.1:1844521-1844752 | - |
- | FG27_RS19515 | WP_255351525.1 | 29568 - 29949 (+) | NZ_JQNQ01000001.1:1844687-1845068 | - |
- | FG27_RS19520 | WP_255351526.1 | 29887 - 30256 (+) | NZ_JQNQ01000001.1:1845006-1845375 | - |
- | FG27_RS19525 | WP_255351556.1 | 30216 - 30546 (+) | NZ_JQNQ01000001.1:1845335-1845665 | - |
- | FG27_RS08130 | WP_037317865.1 | 30612 - 31431 (-) | NZ_JQNQ01000001.1:1845731-1846550 | 3.-.-.- |
- | FG27_RS08135 | WP_051935789.1 | 31563 - 33768 (-) | NZ_JQNQ01000001.1:1846682-1848887 | 3.2.1.- |
- | FG27_RS08140 | WP_037317868.1 | 33788 - 34955 (-) | NZ_JQNQ01000001.1:1848907-1850074 | - |
- | FG27_RS08145 | WP_037317871.1 | 35080 - 36112 (-) | NZ_JQNQ01000001.1:1850199-1851231 | - |
- | FG27_RS19130 | WP_156101216.1 | 36227 - 36389 (-) | NZ_JQNQ01000001.1:1851346-1851508 | - |
- | FG27_RS19240 | WP_197051675.1 | 36609 - 36861 (-) | NZ_JQNQ01000001.1:1851728-1851980 | - |
- | FG27_RS19245 | WP_197051676.1 | 36863 - 37709 (-) | NZ_JQNQ01000001.1:1851982-1852828 | - |
- | FG27_RS19250 | WP_197051677.1 | 37745 - 38696 (-) | NZ_JQNQ01000001.1:1852864-1853815 | - |
- | FG27_RS08155 | WP_051935790.1 | 39106 - 40924 (-) | NZ_JQNQ01000001.1:1854225-1856043 | 3.2.1.- |
- | FG27_RS08160 | WP_037317875.1 | 41091 - 42870 (-) | NZ_JQNQ01000001.1:1856210-1857989 | 5.3.1.8 |
- | FG27_RS08165 | WP_037317878.1 | 42952 - 45313 (-) | NZ_JQNQ01000001.1:1858071-1860432 | 3.2.1.- |
- | FG27_RS08170 | WP_037317881.1 | 45323 - 46466 (-) | NZ_JQNQ01000001.1:1860442-1861585 | - |
Cluster number |
1 | ||
Gene name |
Gene position |
Gene type |
Found by CGCFinder? |
- | 1 - 927 (-) | CDS | No |
- | 1110 - 2423 (-) | TC: gnl|TC-DB|A1S5F4|2.A.1.7.10 | Yes |
- | 2427 - 4796 (-) | CAZyme: GH92 | Yes |
- | 4838 - 7132 (-) | CAZyme: GH92 | Yes |
- | 7144 - 8169 (-) | CAZyme: GH43_34 | Yes |
- | 8185 - 8883 (-) | other | Yes |
- | 8895 - 10622 (-) | CAZyme: AA3 | Yes |
- | 10640 - 11764 (-) | other | Yes |
- | 11806 - 13239 (-) | CAZyme: GH125 | Yes |
- | 13310 - 13984 (-) | other | Yes |
- | 14318 - 15118 (-) | CAZyme: CBM32 | Yes |
- | 15133 - 16749 (-) | TC: gnl|TC-DB|Q8A1G2|8.A.46.1.1 | Yes |
- | 16762 - 19824 (-) | TC: gnl|TC-DB|Q45780|1.B.14.6.1 | Yes |
- | 19944 - 22241 (-) | CAZyme: GH92 | Yes |
- | 22168 - 23112 (-) | other | Yes |
- | 23292 - 25379 (+) | CAZyme: GH92 | Yes |
- | 25376 - 26605 (+) | other | Yes |
- | 26950 - 28428 (+) | other | Yes |
- | 28475 - 29302 (+) | other | Yes |
- | 29403 - 29633 (+) | other | Yes |
- | 29569 - 29949 (+) | other | Yes |
- | 29888 - 30256 (+) | other | Yes |
- | 30217 - 30546 (+) | other | Yes |
- | 30613 - 31431 (-) | other | Yes |
- | 31564 - 33768 (-) | CAZyme: GH92 | Yes |
- | 33789 - 34955 (-) | CAZyme: GH76 | Yes |
- | 35081 - 36112 (-) | TF: DBD-Pfam|LacI,DBD-SUPERFAMILY|0044558 | Yes |
- | 36228 - 36389 (-) | other | Yes |
- | 36610 - 36861 (-) | other | Yes |
- | 36864 - 37709 (-) | other | Yes |
- | 37746 - 38696 (-) | other | Yes |
- | 39107 - 40924 (-) | CAZyme: GH2 | Yes |
- | 41092 - 42870 (-) | other | Yes |
- | 42953 - 45313 (-) | CAZyme: GH92 | Yes |
- | 45324 - 46466 (-) | TC: gnl|TC-DB|Q8A5Y0|2.A.1.7.16 | Yes |
Copyright 2020 © YIN LAB, UNL. All rights reserved. Designed by Catie Ausland and Jinfang Zheng. Maintained by Yanbin Yin.