Search Results

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MultiGeneBlast hits


Query: Escherichia coli strain O146 O antigen gene cluster, complete
DQ465249 : Escherichia coli strain O146 O antigen gene cluster    Total score: 16.0     Cumulative Blast bit score: 7076
Hit cluster cross-links:   
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
dTDP-glucose 4,6-dehydratase
Accession: ABE98429
Location: 301-1194

BlastP hit with rmlB
Percentage identity: 100 %
BlastP bit score: 619
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlB
dTDP-4-dyhydrorhamnose reductase
Accession: ABE98430
Location: 1194-2093

BlastP hit with rmlD
Percentage identity: 100 %
BlastP bit score: 616
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlD
glucose-1-phosphate thymidylyltransferase
Accession: ABE98431
Location: 2151-3029

BlastP hit with rmlA
Percentage identity: 100 %
BlastP bit score: 602
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Accession: ABE98432
Location: 3034-3567

BlastP hit with rmlC
Percentage identity: 100 %
BlastP bit score: 365
Sequence coverage: 100 %
E-value: 9e-127

NCBI BlastP on this gene
rmlC
nitroreductase
Accession: ABE98433
Location: 3582-4574

BlastP hit with wbuD
Percentage identity: 100 %
BlastP bit score: 671
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
wbuD
flippase
Accession: ABE98434
Location: 4571-6109

BlastP hit with wzx
Percentage identity: 100 %
BlastP bit score: 1004
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
wzx
unknown
Accession: ABE98435
Location: 6102-7205

BlastP hit with wbuE
Percentage identity: 100 %
BlastP bit score: 757
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
wbuE
glycosyltransferase
Accession: ABE98436
Location: 7552-8352

BlastP hit with wbwU
Percentage identity: 100 %
BlastP bit score: 536
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
wbwU
polymerase
Accession: ABE98437
Location: 8472-9650

BlastP hit with wzy
Percentage identity: 100 %
BlastP bit score: 758
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
wzy
glycosyltransferase
Accession: ABE98438
Location: 9613-10500

BlastP hit with wbwV
Percentage identity: 100 %
BlastP bit score: 591
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
wbwV
glycosyltransferase
Accession: ABE98439
Location: 10550-11362

BlastP hit with wbwW
Percentage identity: 100 %
BlastP bit score: 557
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
wbwW
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP022959 : Escherichia coli ATCC 8739 chromosome    Total score: 15.5     Cumulative Blast bit score: 6858
Hit cluster cross-links:   
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans, octacis-undecaprenol 4-epimerase
Accession: AYB97326
Location: 1779082-1780077
NCBI BlastP on this gene
CJZ69_08900
UTP--glucose-1-phosphate uridylyltransferase
Accession: AYB97327
Location: 1780320-1781213
NCBI BlastP on this gene
galF
hypothetical protein
Accession: AYB97328
Location: 1781250-1781513
NCBI BlastP on this gene
CJZ69_08910
dTDP-glucose 4,6-dehydratase
Accession: AYB97329
Location: 1781585-1782670

BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 611
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession: AYB97330
Location: 1782670-1783569

BlastP hit with rmlD
Percentage identity: 95 %
BlastP bit score: 600
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
CJZ69_08920
glucose-1-phosphate thymidylyltransferase RfbA
Accession: AYB97331
Location: 1783627-1784505

BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 596
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rfbA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession: AYB97332
Location: 1784510-1785043

BlastP hit with rmlC
Percentage identity: 98 %
BlastP bit score: 361
Sequence coverage: 100 %
E-value: 8e-125

NCBI BlastP on this gene
rfbC
hypothetical protein
Accession: AYB97333
Location: 1785058-1786050

BlastP hit with wbuD
Percentage identity: 100 %
BlastP bit score: 671
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
CJZ69_08935
hypothetical protein
Accession: AYC00079
Location: 1786059-1787585

BlastP hit with wzx
Percentage identity: 99 %
BlastP bit score: 986
Sequence coverage: 99 %
E-value: 0.0

NCBI BlastP on this gene
CJZ69_08940
polysaccharide pyruvyl transferase family protein
Accession: AYB97334
Location: 1787578-1788681

BlastP hit with wbuE
Percentage identity: 99 %
BlastP bit score: 753
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
CJZ69_08945
glycosyl hydrolase family 1
Accession: AYB97335
Location: 1788687-1789829

BlastP hit with wbwU
Percentage identity: 100 %
BlastP bit score: 538
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
CJZ69_08950
hypothetical protein
Accession: AYB97336
Location: 1789891-1791126

BlastP hit with wzy
Percentage identity: 99 %
BlastP bit score: 756
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
CJZ69_08955
glycosyltransferase family 2 protein
Accession: AYB97337
Location: 1791089-1791976

BlastP hit with wbwV
Percentage identity: 98 %
BlastP bit score: 583
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
CJZ69_08960
amylovoran biosynthesis protein AmsE
Accession: CJZ69_08965
Location: 1792026-1792262
NCBI BlastP on this gene
CJZ69_08965
IS1 family transposase
Accession: CJZ69_08970
Location: 1792276-1792973
NCBI BlastP on this gene
CJZ69_08970
glycosyl transferase
Accession: CJZ69_08975
Location: 1792930-1793028
NCBI BlastP on this gene
CJZ69_08975
amylovoran biosynthesis protein AmsE
Accession: CJZ69_08980
Location: 1793030-1793614

BlastP hit with wbwW
Percentage identity: 100 %
BlastP bit score: 403
Sequence coverage: 71 %
E-value: 9e-140

NCBI BlastP on this gene
CJZ69_08980
phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating)
Accession: AYB97338
Location: 1794101-1795507
NCBI BlastP on this gene
CJZ69_08985
UDP-glucose 6-dehydrogenase
Accession: AYB97339
Location: 1795756-1796922
NCBI BlastP on this gene
CJZ69_08990
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP000946 : Escherichia coli ATCC 8739    Total score: 14.5     Cumulative Blast bit score: 6463
Hit cluster cross-links:   
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
conserved hypothetical protein
Accession: ACA77257
Location: 1777533-1778927
NCBI BlastP on this gene
EcolC_1598
NAD-dependent epimerase/dehydratase
Accession: ACA77258
Location: 1779085-1780080
NCBI BlastP on this gene
EcolC_1599
regulatory protein GalF
Accession: ACA77259
Location: 1780323-1781216
NCBI BlastP on this gene
EcolC_1600
dTDP-glucose 4,6-dehydratase
Accession: ACA77260
Location: 1781588-1782673

BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 611
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
EcolC_1601
dTDP-4-dehydrorhamnose reductase
Accession: ACA77261
Location: 1782673-1783572

BlastP hit with rmlD
Percentage identity: 95 %
BlastP bit score: 600
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
EcolC_1602
glucose-1-phosphate thymidylyltransferase
Accession: ACA77262
Location: 1783630-1784508

BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 596
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
EcolC_1603
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession: ACA77263
Location: 1784513-1785046

BlastP hit with rmlC
Percentage identity: 98 %
BlastP bit score: 361
Sequence coverage: 100 %
E-value: 8e-125

NCBI BlastP on this gene
EcolC_1604
nitroreductase
Accession: ACA77264
Location: 1785061-1786053

BlastP hit with wbuD
Percentage identity: 100 %
BlastP bit score: 671
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
EcolC_1605
putative transmembrane protein
Accession: ACA77265
Location: 1786050-1787588

BlastP hit with wzx
Percentage identity: 99 %
BlastP bit score: 994
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
EcolC_1606
conserved hypothetical protein
Accession: ACA77266
Location: 1787581-1788684

BlastP hit with wbuE
Percentage identity: 99 %
BlastP bit score: 753
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
EcolC_1607
glycosyl transferase group 1
Accession: ACA77267
Location: 1788690-1789832

BlastP hit with wbwU
Percentage identity: 100 %
BlastP bit score: 538
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
EcolC_1608
hypothetical protein
Accession: ACA77268
Location: 1789894-1791129

BlastP hit with wzy
Percentage identity: 99 %
BlastP bit score: 756
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
EcolC_1609
glycosyl transferase family 2
Accession: ACA77269
Location: 1791092-1791979

BlastP hit with wbwV
Percentage identity: 98 %
BlastP bit score: 583
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
EcolC_1610
Insertion element protein
Accession: ACA77270
Location: 1792279-1792976
NCBI BlastP on this gene
EcolC_1612
6-phosphogluconate dehydrogenase, decarboxylating
Accession: ACA77271
Location: 1794104-1795510
NCBI BlastP on this gene
EcolC_1613
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP025753 : Escherichia coli strain CV839-06 chromosome    Total score: 8.0     Cumulative Blast bit score: 2418
Hit cluster cross-links:   
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid biosynthesis glycosyltransferase WcaL
Accession: AUP46366
Location: 3848188-3849408
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein
Accession: AUP46367
Location: 3849419-3850813
NCBI BlastP on this gene
wcaM
UDP-N-acetylglucosamine 4-epimerase
Accession: AUP46368
Location: 3850971-3851966
NCBI BlastP on this gene
CV83906_3804
UTP--glucose-1-phosphate uridylyltransferase subunit GalU UTP--glucose-1-phosphate uridylyltransferase
Accession: AUP46369
Location: 3852209-3853102
NCBI BlastP on this gene
CV83906_3805
dTDP-glucose 4,6-dehydratase
Accession: AUP46370
Location: 3853475-3854560

BlastP hit with rmlB
Percentage identity: 98 %
BlastP bit score: 612
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
CV83906_3806
dTDP-4-dehydrorhamnose reductase
Accession: AUP46371
Location: 3854560-3855462

BlastP hit with rmlD
Percentage identity: 94 %
BlastP bit score: 591
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rfbD
glucose-1-phosphate thymidylyltransferase
Accession: AUP46372
Location: 3855517-3856395

BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 595
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
CV83906_3808
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession: AUP46373
Location: 3856400-3856957

BlastP hit with rmlC
Percentage identity: 63 %
BlastP bit score: 238
Sequence coverage: 100 %
E-value: 2e-76

NCBI BlastP on this gene
rfbC
transporter
Accession: AUP46374
Location: 3856954-3858186
NCBI BlastP on this gene
CV83906_3810
polymerase
Accession: AUP46375
Location: 3858242-3859429

BlastP hit with wzy
Percentage identity: 42 %
BlastP bit score: 225
Sequence coverage: 95 %
E-value: 2e-65

NCBI BlastP on this gene
CV83906_3811
dTDP-rhamnosyl transferase
Accession: AUP46376
Location: 3859446-3860315

BlastP hit with wbwV
Percentage identity: 32 %
BlastP bit score: 157
Sequence coverage: 96 %
E-value: 5e-42

NCBI BlastP on this gene
CV83906_3812
N-acetylgalactosaminyl-diphosphoundecaprenol glucuronosyltransferase
Accession: AUP46377
Location: 3860312-3861145
NCBI BlastP on this gene
CV83906_3813
6-phosphogluconate dehydrogenase
Accession: AUP46378
Location: 3861250-3862656
NCBI BlastP on this gene
CV83906_3814
UDP-glucose 6-dehydrogenase
Accession: AUP46379
Location: 3862905-3864071
NCBI BlastP on this gene
CV83906_3815
hypothetical protein
Accession: AUP46380
Location: 3864137-3865141
NCBI BlastP on this gene
CV83906_3816
Query: Escherichia coli strain O146 O antigen gene cluster, complete
DQ868766 : Escherichia coli serogroup O147 O-antigen gene cluster    Total score: 8.0     Cumulative Blast bit score: 2417
Hit cluster cross-links:   
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
RmlB
Accession: ABI98981
Location: 1138-2223

BlastP hit with rmlB
Percentage identity: 98 %
BlastP bit score: 612
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlB
RmlD
Accession: ABI98982
Location: 2223-3125

BlastP hit with rmlD
Percentage identity: 94 %
BlastP bit score: 591
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlD
RmlA
Accession: ABI98983
Location: 3180-4058

BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 595
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlA
RmlC
Accession: ABI98984
Location: 4063-4620

BlastP hit with rmlC
Percentage identity: 63 %
BlastP bit score: 238
Sequence coverage: 100 %
E-value: 2e-76

NCBI BlastP on this gene
rmlC
Wzx
Accession: ABI98985
Location: 4617-5849
NCBI BlastP on this gene
wzx
Wzy
Accession: ABI98986
Location: 5905-7092

BlastP hit with wzy
Percentage identity: 42 %
BlastP bit score: 225
Sequence coverage: 95 %
E-value: 2e-65

NCBI BlastP on this gene
wzy
WfbY
Accession: ABI98987
Location: 7109-7978

BlastP hit with wbwV
Percentage identity: 32 %
BlastP bit score: 156
Sequence coverage: 96 %
E-value: 1e-41

NCBI BlastP on this gene
wfbY
WfbZ
Accession: ABI98988
Location: 7975-8808
NCBI BlastP on this gene
wfbZ
Query: Escherichia coli strain O146 O antigen gene cluster, complete
EU294165 : Shigella flexneri 6 O antigen gene cluster    Total score: 8.0     Cumulative Blast bit score: 2410
Hit cluster cross-links:   
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
RmlB
Accession: ACA24767
Location: 107-1192

BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 608
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlB
RmlD
Accession: ACA24768
Location: 1192-2091

BlastP hit with rmlD
Percentage identity: 94 %
BlastP bit score: 587
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlD
RmlA
Accession: ACA24769
Location: 2149-3027

BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 595
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlA
RmlC
Accession: ACA24770
Location: 3032-3589

BlastP hit with rmlC
Percentage identity: 63 %
BlastP bit score: 238
Sequence coverage: 100 %
E-value: 2e-76

NCBI BlastP on this gene
rmlC
Wzx
Accession: ACA24771
Location: 3586-4818
NCBI BlastP on this gene
wzx
Wzy
Accession: ACA24772
Location: 4874-6061

BlastP hit with wzy
Percentage identity: 42 %
BlastP bit score: 225
Sequence coverage: 95 %
E-value: 2e-65

NCBI BlastP on this gene
wzy
WfbY
Accession: ACA24773
Location: 6078-6947

BlastP hit with wbwV
Percentage identity: 32 %
BlastP bit score: 157
Sequence coverage: 96 %
E-value: 5e-42

NCBI BlastP on this gene
wfbY
WfbZ
Accession: ACA24774
Location: 6944-7777
NCBI BlastP on this gene
wfbZ
Query: Escherichia coli strain O146 O antigen gene cluster, complete
EU118169 : Shigella flexneri strain NCTC9779 O-antigen gene cluster    Total score: 8.0     Cumulative Blast bit score: 2410
Hit cluster cross-links:   
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
GalF
Accession: ABU80595
Location: 1-657
NCBI BlastP on this gene
galF
dTDP-D-glucose 4,6-dehydratase
Accession: ABU80596
Location: 1030-2115

BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 608
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlB
dTDP-6-deoxy-L-mannose dehydrogenase
Accession: ABU80597
Location: 2115-3014

BlastP hit with rmlD
Percentage identity: 94 %
BlastP bit score: 587
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlD
glucose-1-phosphate thymidylyltransferase
Accession: ABU80598
Location: 3072-3950

BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 595
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Accession: ABU80599
Location: 3955-4512

BlastP hit with rmlC
Percentage identity: 63 %
BlastP bit score: 238
Sequence coverage: 100 %
E-value: 2e-76

NCBI BlastP on this gene
rmlC
O-antigen flippase
Accession: ABU80600
Location: 4509-5741
NCBI BlastP on this gene
wzx
O-antigen polymerase
Accession: ABU80601
Location: 5797-6984

BlastP hit with wzy
Percentage identity: 42 %
BlastP bit score: 225
Sequence coverage: 95 %
E-value: 2e-65

NCBI BlastP on this gene
wzy
glycosyltransferase
Accession: ABU80602
Location: 7001-7870

BlastP hit with wbwV
Percentage identity: 32 %
BlastP bit score: 157
Sequence coverage: 96 %
E-value: 5e-42

NCBI BlastP on this gene
wfbY
glycosyltransferase
Accession: ABU80603
Location: 7867-8700
NCBI BlastP on this gene
wfbZ
Gnd
Accession: ABU80604
Location: 8805-8900
NCBI BlastP on this gene
gnd
Query: Escherichia coli strain O146 O antigen gene cluster, complete
EU118168 : Shigella flexneri strain IB1833 O-antigen gene cluster    Total score: 8.0     Cumulative Blast bit score: 2410
Hit cluster cross-links:   
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
GalF
Accession: ABU80585
Location: 1-657
NCBI BlastP on this gene
galF
dTDP-D-glucose 4,6-dehydratase
Accession: ABU80586
Location: 1030-2115

BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 608
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlB
dTDP-6-deoxy-L-mannose dehydrogenase
Accession: ABU80587
Location: 2115-3014

BlastP hit with rmlD
Percentage identity: 94 %
BlastP bit score: 587
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlD
glucose-1-phosphate thymidylyltransferase
Accession: ABU80588
Location: 3072-3950

BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 595
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Accession: ABU80589
Location: 3955-4512

BlastP hit with rmlC
Percentage identity: 63 %
BlastP bit score: 238
Sequence coverage: 100 %
E-value: 2e-76

NCBI BlastP on this gene
rmlC
O-antigen flippase
Accession: ABU80590
Location: 4509-5741
NCBI BlastP on this gene
wzx
O-antigen polymerase
Accession: ABU80591
Location: 5797-6984

BlastP hit with wzy
Percentage identity: 42 %
BlastP bit score: 225
Sequence coverage: 95 %
E-value: 2e-65

NCBI BlastP on this gene
wzy
glycosyltransferase
Accession: ABU80592
Location: 7001-7870

BlastP hit with wbwV
Percentage identity: 32 %
BlastP bit score: 157
Sequence coverage: 96 %
E-value: 5e-42

NCBI BlastP on this gene
wfbY
glycosyltransferase
Accession: ABU80593
Location: 7867-8700
NCBI BlastP on this gene
wfbZ
Gnd
Accession: ABU80594
Location: 8805-8900
NCBI BlastP on this gene
gnd
Query: Escherichia coli strain O146 O antigen gene cluster, complete
EU294168 : Escherichia coli serotype O150 O antigen gene cluster    Total score: 8.0     Cumulative Blast bit score: 2259
Hit cluster cross-links:   
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
RmlB
Accession: ACA24793
Location: 1138-2223

BlastP hit with rmlB
Percentage identity: 98 %
BlastP bit score: 616
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlB
RmlD
Accession: ACA24794
Location: 2223-3122

BlastP hit with rmlD
Percentage identity: 95 %
BlastP bit score: 594
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlD
RmlA
Accession: ACA24795
Location: 3180-4058

BlastP hit with rmlA
Percentage identity: 99 %
BlastP bit score: 598
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlA
RmlC
Accession: ACA24796
Location: 4063-4614

BlastP hit with rmlC
Percentage identity: 66 %
BlastP bit score: 235
Sequence coverage: 96 %
E-value: 3e-75

NCBI BlastP on this gene
rmlC
WfgF
Accession: ACA24797
Location: 4616-5599

BlastP hit with wbuD
Percentage identity: 33 %
BlastP bit score: 94
Sequence coverage: 60 %
E-value: 7e-19

NCBI BlastP on this gene
wfgF
Wzx
Accession: ACA24798
Location: 5632-7134
NCBI BlastP on this gene
wzx
WfgG
Accession: ACA24799
Location: 7137-8282
NCBI BlastP on this gene
wfgG
WfgH
Accession: ACA24800
Location: 8307-9197
NCBI BlastP on this gene
wfgH
WfgI
Accession: ACA24801
Location: 9184-10098

BlastP hit with wbwV
Percentage identity: 31 %
BlastP bit score: 122
Sequence coverage: 100 %
E-value: 8e-29

NCBI BlastP on this gene
wfgI
WfgK
Accession: ACA24802
Location: 10098-10994
NCBI BlastP on this gene
wfgK
Wzy
Accession: ACA24803
Location: 11012-12109
NCBI BlastP on this gene
wzy
Query: Escherichia coli strain O146 O antigen gene cluster, complete
KY710702 : Proteus vulgaris strain PrK 48/57 O antigen gene cluster    Total score: 7.5     Cumulative Blast bit score: 1416
Hit cluster cross-links:   
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
rmlD
Accession: AXY99577
Location: 1039-1920
NCBI BlastP on this gene
AXY99577
rmlA
Accession: AXY99578
Location: 1946-2824
NCBI BlastP on this gene
AXY99578
rmlC
Accession: AXY99579
Location: 2827-3372

BlastP hit with rmlC
Percentage identity: 67 %
BlastP bit score: 241
Sequence coverage: 99 %
E-value: 2e-77

NCBI BlastP on this gene
AXY99579
hypothetical protein
Accession: AXY99580
Location: 3374-4462
NCBI BlastP on this gene
AXY99580
wzx
Accession: AXY99581
Location: 4449-5960

BlastP hit with wzx
Percentage identity: 38 %
BlastP bit score: 297
Sequence coverage: 85 %
E-value: 2e-90

NCBI BlastP on this gene
AXY99581
Polysaccharide pyruvyl transferase
Accession: AXY99582
Location: 5957-7060

BlastP hit with wbuE
Percentage identity: 46 %
BlastP bit score: 322
Sequence coverage: 98 %
E-value: 2e-103

NCBI BlastP on this gene
AXY99582
gt1
Accession: AXY99583
Location: 7066-8220

BlastP hit with wbwU
Percentage identity: 41 %
BlastP bit score: 205
Sequence coverage: 102 %
E-value: 1e-59

NCBI BlastP on this gene
AXY99583
gt2
Accession: AXY99584
Location: 8230-9081

BlastP hit with wbwV
Percentage identity: 45 %
BlastP bit score: 196
Sequence coverage: 89 %
E-value: 4e-57

NCBI BlastP on this gene
AXY99584
wzy
Accession: AXY99585
Location: 9071-10249

BlastP hit with wzy
Percentage identity: 35 %
BlastP bit score: 155
Sequence coverage: 82 %
E-value: 2e-39

NCBI BlastP on this gene
AXY99585
hypothetical protein
Accession: AXY99586
Location: 10411-10935
NCBI BlastP on this gene
AXY99586
hypothetical protein
Accession: AXY99587
Location: 10938-11663
NCBI BlastP on this gene
AXY99587
gt3
Accession: AXY99588
Location: 11863-12528
NCBI BlastP on this gene
AXY99588
ugd
Accession: AXY99589
Location: 12933-14099
NCBI BlastP on this gene
AXY99589
wenM
Accession: AXY99590
Location: 14111-14614
NCBI BlastP on this gene
AXY99590
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP014197 : Escherichia coli strain MRE600    Total score: 7.0     Cumulative Blast bit score: 2147
Hit cluster cross-links:   
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid transporter
Accession: AMB53781
Location: 1640350-1641828
NCBI BlastP on this gene
AWB62_08105
colanic acid biosynthesis pyruvyl transferase WcaK
Accession: AMB53782
Location: 1642104-1643384
NCBI BlastP on this gene
AWB62_08110
colanic acid biosynthesis glycosyltransferase WcaL
Accession: AWB62_08115
Location: 1643381-1644600
NCBI BlastP on this gene
AWB62_08115
colanic acid biosynthesis protein WcaM
Accession: AMB53783
Location: 1644611-1646005
NCBI BlastP on this gene
wcaM
UTP--glucose-1-phosphate uridylyltransferase
Accession: AMB53784
Location: 1646180-1647073
NCBI BlastP on this gene
AWB62_08125
dTDP-glucose 4,6-dehydratase
Accession: AMB53785
Location: 1647445-1648530

BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 611
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
AWB62_08130
dTDP-4-dehydrorhamnose reductase
Accession: AMB53786
Location: 1648530-1649429

BlastP hit with rmlD
Percentage identity: 97 %
BlastP bit score: 605
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
AWB62_08135
glucose-1-phosphate thymidylyltransferase
Accession: AMB53787
Location: 1649487-1650365

BlastP hit with rmlA
Percentage identity: 99 %
BlastP bit score: 598
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
AWB62_08140
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession: AMB53788
Location: 1650370-1650921

BlastP hit with rmlC
Percentage identity: 66 %
BlastP bit score: 239
Sequence coverage: 96 %
E-value: 1e-76

NCBI BlastP on this gene
AWB62_08145
hypothetical protein
Accession: AMB53789
Location: 1650923-1651906

BlastP hit with wbuD
Percentage identity: 32 %
BlastP bit score: 94
Sequence coverage: 60 %
E-value: 1e-18

NCBI BlastP on this gene
AWB62_08150
hypothetical protein
Accession: AMB53790
Location: 1651939-1653441
NCBI BlastP on this gene
AWB62_08155
hypothetical protein
Accession: AMB53791
Location: 1653444-1654589
NCBI BlastP on this gene
AWB62_08160
hypothetical protein
Accession: AMB53792
Location: 1654596-1655504
NCBI BlastP on this gene
AWB62_08165
hypothetical protein
Accession: AMB53793
Location: 1655491-1656405
NCBI BlastP on this gene
AWB62_08170
glycosyl transferase
Accession: AMB56687
Location: 1656417-1657301
NCBI BlastP on this gene
AWB62_08175
hypothetical protein
Accession: AMB53794
Location: 1657319-1658416
NCBI BlastP on this gene
AWB62_08180
Query: Escherichia coli strain O146 O antigen gene cluster, complete
EU294167 : Shigella dysenteriae O antigen gene cluster    Total score: 7.0     Cumulative Blast bit score: 2146
Hit cluster cross-links:   
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
RmlB
Accession: ACA24782
Location: 1137-2222

BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 611
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlB
RmlD
Accession: ACA24783
Location: 2222-3121

BlastP hit with rmlD
Percentage identity: 97 %
BlastP bit score: 604
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlD
RmlA
Accession: ACA24784
Location: 3179-4057

BlastP hit with rmlA
Percentage identity: 99 %
BlastP bit score: 598
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlA
RmlC
Accession: ACA24785
Location: 4062-4613

BlastP hit with rmlC
Percentage identity: 66 %
BlastP bit score: 239
Sequence coverage: 96 %
E-value: 1e-76

NCBI BlastP on this gene
rmlC
WfgF
Accession: ACA24786
Location: 4615-5598

BlastP hit with wbuD
Percentage identity: 32 %
BlastP bit score: 94
Sequence coverage: 60 %
E-value: 1e-18

NCBI BlastP on this gene
wfgF
Wzx
Accession: ACA24787
Location: 5631-7133
NCBI BlastP on this gene
wzx
WfgG
Accession: ACA24788
Location: 7136-8281
NCBI BlastP on this gene
wfgG
WfgH
Accession: ACA24789
Location: 8306-9196
NCBI BlastP on this gene
wfgH
WfgI
Accession: ACA24790
Location: 9183-10097
NCBI BlastP on this gene
wfgI
WfgK
Accession: ACA24791
Location: 10097-10993
NCBI BlastP on this gene
wfgK
Wzy
Accession: ACA24792
Location: 11011-12108
NCBI BlastP on this gene
wzy
Query: Escherichia coli strain O146 O antigen gene cluster, complete
LC494338 : Escherichia albertii V3-1al genes for O-antigen region    Total score: 6.5     Cumulative Blast bit score: 2576
Hit cluster cross-links:   
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
predicted UTP-glucose-1-phosphate uridylyltransferase
Accession: BBM62815
Location: 1872-2765
NCBI BlastP on this gene
galF
predicted dTDP-glucose 4,6-dehydratase
Accession: BBM62816
Location: 3137-4222
NCBI BlastP on this gene
rmlB
predicted dTDP-4-dehydrorhamnose reductase
Accession: BBM62817
Location: 4222-5121
NCBI BlastP on this gene
rmlD
predicted glucose-1-phosphate thymidylyltransferase
Accession: BBM62818
Location: 5179-6057

BlastP hit with rmlA
Percentage identity: 97 %
BlastP bit score: 593
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rfbA
predicted dTDP-4-dehydrorhamnose 3,5-epimerase
Accession: BBM62819
Location: 6062-6595

BlastP hit with rmlC
Percentage identity: 68 %
BlastP bit score: 239
Sequence coverage: 96 %
E-value: 5e-77

NCBI BlastP on this gene
rmlC
predicted O-antigen flippase
Accession: BBM62820
Location: 6629-7870
NCBI BlastP on this gene
wzx
predicted glycerophosphotransferase family protein
Accession: BBM62821
Location: 7867-9069
NCBI BlastP on this gene
BBM62821
predicted glycosyltransferase, GTA type superfamily
Accession: BBM62822
Location: 10497-11987
NCBI BlastP on this gene
BBM62822
O-antigen polymerase
Accession: BBM62823
Location: 14896-16131

BlastP hit with wzy
Percentage identity: 92 %
BlastP bit score: 646
Sequence coverage: 99 %
E-value: 0.0

NCBI BlastP on this gene
wzy
glycosyl transferase family 2
Accession: BBM62824
Location: 16094-16981

BlastP hit with wbwV
Percentage identity: 96 %
BlastP bit score: 570
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
BBM62824
glycosyl transferase family 2
Accession: BBM62825
Location: 17031-17843

BlastP hit with wbwW
Percentage identity: 94 %
BlastP bit score: 528
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
BBM62825
NADP-dependent phosphogluconate dehydrogenase
Accession: BBM62826
Location: 18314-19720
NCBI BlastP on this gene
gnd
UDP-glucose 6-dehydrogenase
Accession: BBM62827
Location: 19962-21128
NCBI BlastP on this gene
ugd
Query: Escherichia coli strain O146 O antigen gene cluster, complete
KP835691 : Escherichia coli strain 8547 serotype OX43:H28 O-antigen gene cluster    Total score: 6.5     Cumulative Blast bit score: 2308
Hit cluster cross-links:   
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
dTDP-glucose 4,6-dehydratase
Accession: AKM71180
Location: 108-1193

BlastP hit with rmlB
Percentage identity: 96 %
BlastP bit score: 602
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlB
dTDP-4-dehydrorhamnose reductase
Accession: AKM71181
Location: 1193-2092

BlastP hit with rmlD
Percentage identity: 94 %
BlastP bit score: 590
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlD
glucose-1-phosphate thymidylyltransferase 1
Accession: AKM71182
Location: 2150-3028

BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 595
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession: AKM71183
Location: 3033-3587

BlastP hit with rmlC
Percentage identity: 67 %
BlastP bit score: 241
Sequence coverage: 96 %
E-value: 1e-77

NCBI BlastP on this gene
rmlC
O-antigene flippase
Accession: AKM71184
Location: 3584-4840
NCBI BlastP on this gene
wzx
O-antigene polymerase
Accession: AKM71185
Location: 4842-5966
NCBI BlastP on this gene
AKM71185
glycosyltransferase family 2
Accession: AKM71186
Location: 5954-6856

BlastP hit with wbwV
Percentage identity: 33 %
BlastP bit score: 147
Sequence coverage: 100 %
E-value: 4e-38

NCBI BlastP on this gene
AKM71186
rhamnosyltransferase
Accession: AKM71187
Location: 6904-7785

BlastP hit with wbwV
Percentage identity: 34 %
BlastP bit score: 133
Sequence coverage: 91 %
E-value: 6e-33

NCBI BlastP on this gene
AKM71187
H repeat-associated protein
Accession: AKM71188
Location: 8134-9270
NCBI BlastP on this gene
yhhI
rhamnosyl transferase I domain protein
Accession: AKM71189
Location: 9365-9493
NCBI BlastP on this gene
AKM71189
glycosyl hydrolase family 1
Accession: AKM71190
Location: 9503-10594
NCBI BlastP on this gene
wbbG
Query: Escherichia coli strain O146 O antigen gene cluster, complete
AB811604 : Escherichia coli DNA, O-antigen biosynthetic locus, strain: F8188-41.    Total score: 6.5     Cumulative Blast bit score: 2308
Hit cluster cross-links:   
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
not annotated
Accession: BAQ00698
Location: 1-906
NCBI BlastP on this gene
wcaM
UTP-glucose-1-phosphate uridylyltransferase
Accession: BAQ00699
Location: 1069-1974
NCBI BlastP on this gene
galF
dTDP-glucose 4,6 dehydratase
Accession: BAQ00700
Location: 2345-3430

BlastP hit with rmlB
Percentage identity: 96 %
BlastP bit score: 602
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlB
dTDP-4-dehydrorhamnose reductase
Accession: BAQ00701
Location: 3430-4329

BlastP hit with rmlD
Percentage identity: 94 %
BlastP bit score: 590
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlD
glucose-1-phosphate thymidylyltransferase
Accession: BAQ00702
Location: 4387-5265

BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 595
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession: BAQ00703
Location: 5270-5824

BlastP hit with rmlC
Percentage identity: 67 %
BlastP bit score: 241
Sequence coverage: 96 %
E-value: 1e-77

NCBI BlastP on this gene
rmlC
O-antigen flippase
Accession: BAQ00704
Location: 5821-7077
NCBI BlastP on this gene
wzx
O-antigen polymerase
Accession: BAQ00705
Location: 7079-8203
NCBI BlastP on this gene
wzy
putative glycosyltransferase
Accession: BAQ00706
Location: 8191-9093

BlastP hit with wbwV
Percentage identity: 33 %
BlastP bit score: 147
Sequence coverage: 100 %
E-value: 4e-38

NCBI BlastP on this gene
BAQ00706
putative glycosyltransferase
Accession: BAQ00707
Location: 9141-10022

BlastP hit with wbwV
Percentage identity: 34 %
BlastP bit score: 133
Sequence coverage: 91 %
E-value: 7e-33

NCBI BlastP on this gene
BAQ00707
transposase of ISEc1
Accession: BAQ00708
Location: 10371-11507
NCBI BlastP on this gene
BAQ00708
putative glycosyltransferase
Accession: BAQ00709
Location: 11740-12831
NCBI BlastP on this gene
BAQ00709
6-phosphogluconate dehydrogenase
Accession: BAQ00710
Location: 12939-14345
NCBI BlastP on this gene
gnd
Query: Escherichia coli strain O146 O antigen gene cluster, complete
AB812057 : Escherichia coli genes for O-antigen biosynthetic locus    Total score: 6.5     Cumulative Blast bit score: 2220
Hit cluster cross-links:   
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid biosynthesis protein
Accession: BAQ01666
Location: 3-896
NCBI BlastP on this gene
wcaM
UTP-glucose-1-phosphate uridylyltransferase
Accession: BAQ01667
Location: 1071-1964
NCBI BlastP on this gene
galF
dTDP-glucose 4,6 dehydratase
Accession: BAQ01668
Location: 2335-3420

BlastP hit with rmlB
Percentage identity: 98 %
BlastP bit score: 612
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlB
dTDP-4-dehydrorhamnose reductase
Accession: BAQ01669
Location: 3420-4319

BlastP hit with rmlD
Percentage identity: 97 %
BlastP bit score: 608
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlD
glucose-1-phosphate thymidylyltransferase
Accession: BAQ01670
Location: 4377-5255

BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 595
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession: BAQ01671
Location: 5260-5796

BlastP hit with rmlC
Percentage identity: 67 %
BlastP bit score: 245
Sequence coverage: 99 %
E-value: 3e-79

NCBI BlastP on this gene
rmlC
O-antigen flippase
Accession: BAQ01672
Location: 5836-7077
NCBI BlastP on this gene
wzx
putative glycosyltransferase
Accession: BAQ01673
Location: 7062-7955

BlastP hit with wbwV
Percentage identity: 34 %
BlastP bit score: 160
Sequence coverage: 100 %
E-value: 7e-43

NCBI BlastP on this gene
BAQ01673
putative glycosyltransferase
Accession: BAQ01674
Location: 7961-9067
NCBI BlastP on this gene
BAQ01674
O-antigen polymerase
Accession: BAQ01675
Location: 9381-10538
NCBI BlastP on this gene
wzy
6-phosphogluconate dehydrogenase
Accession: BAQ01676
Location: 10714-12120
NCBI BlastP on this gene
gnd
UDP-glucose 6-dehydrogenase
Accession: BAQ01677
Location: 12369-13535
NCBI BlastP on this gene
ugd
Query: Escherichia coli strain O146 O antigen gene cluster, complete
KJ710509 : Escherichia coli strain N 282 serotype O133:K-:H29 O-antigen gene cluster    Total score: 6.5     Cumulative Blast bit score: 2218
Hit cluster cross-links:   
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
dTDP-glucose 4,6-dehydratase
Accession: AIG62386
Location: 126-1211

BlastP hit with rmlB
Percentage identity: 98 %
BlastP bit score: 612
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlB
dTDP-4-dehydrorhamnose reductase
Accession: AIG62388
Location: 1211-2110

BlastP hit with rmlD
Percentage identity: 97 %
BlastP bit score: 607
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlD
glucose-1-phosphate thymidylyltransferase 1
Accession: AIG62389
Location: 2168-3046

BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 595
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession: AIG62390
Location: 3051-3587

BlastP hit with rmlC
Percentage identity: 67 %
BlastP bit score: 245
Sequence coverage: 99 %
E-value: 3e-79

NCBI BlastP on this gene
rmlC
O-antigen flippase
Accession: AIG62391
Location: 3627-4868
NCBI BlastP on this gene
wzx
glycosyl transferase family 2
Accession: AIG62392
Location: 4844-5746

BlastP hit with wbwV
Percentage identity: 34 %
BlastP bit score: 159
Sequence coverage: 100 %
E-value: 8e-43

NCBI BlastP on this gene
AIG62392
N,
Accession: AIG62393
Location: 5752-6858
NCBI BlastP on this gene
pglA
O-antigen polymerase
Accession: AIG62394
Location: 7172-8329
NCBI BlastP on this gene
wzy
Query: Escherichia coli strain O146 O antigen gene cluster, complete
LC125930 : Escherichia coli DNA, O-antigen biosynthesis gene cluster, strain: 90823.    Total score: 6.5     Cumulative Blast bit score: 2216
Hit cluster cross-links:   
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid biosynthesis protein
Accession: BAU71599
Location: 1-906
NCBI BlastP on this gene
wcaM
UTP-glucose-1-phosphate uridylyltransferase
Accession: BAU71600
Location: 1069-1974
NCBI BlastP on this gene
galF
dTDP-glucose 4,6 dehydratase
Accession: BAU71601
Location: 2347-3432

BlastP hit with rmlB
Percentage identity: 98 %
BlastP bit score: 612
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlB
dTDP-4-dehydrorhamnose reductase
Accession: BAU71602
Location: 3432-4331

BlastP hit with rmlD
Percentage identity: 96 %
BlastP bit score: 602
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlD
glucose-1-phosphate thymidylyltransferase
Accession: BAU71603
Location: 4389-5267

BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 596
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession: BAU71604
Location: 5272-5805

BlastP hit with rmlC
Percentage identity: 68 %
BlastP bit score: 242
Sequence coverage: 96 %
E-value: 4e-78

NCBI BlastP on this gene
rmlC
O-antigen flippase
Accession: BAU71605
Location: 5802-7079
NCBI BlastP on this gene
wzx
putative UDP-N-acetylglucosamine 2-epimerase
Accession: BAU71606
Location: 7091-8224
NCBI BlastP on this gene
BAU71606
putative glycosyltransferase
Accession: BAU71607
Location: 8292-9365
NCBI BlastP on this gene
BAU71607
O-antigen polymerase
Accession: BAU71608
Location: 9557-10576
NCBI BlastP on this gene
wzy
putative glycosyltranslocase
Accession: BAU71609
Location: 10551-11516

BlastP hit with wbwV
Percentage identity: 35 %
BlastP bit score: 164
Sequence coverage: 100 %
E-value: 2e-44

NCBI BlastP on this gene
BAU71609
putative glycosyltranslocase
Accession: BAU71610
Location: 11518-12663
NCBI BlastP on this gene
BAU71610
6-phosphogluconate dehydrogenase
Accession: BAU71611
Location: 12898-14304
NCBI BlastP on this gene
gnd
UDP-glucose 6-dehydrogenase
Accession: BAU71612
Location: 14550-15716
NCBI BlastP on this gene
ugd
Query: Escherichia coli strain O146 O antigen gene cluster, complete
KY115224 : Escherichia coli O1:H33 hypothetical protein gene    Total score: 6.5     Cumulative Blast bit score: 2216
Hit cluster cross-links:   
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
dTDP-glucose-4,6-dehydratase
Accession: AQU71735
Location: 10794-11879

BlastP hit with rmlB
Percentage identity: 98 %
BlastP bit score: 612
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlB
dTDP-4-dehydrorhamnose reductase
Accession: AQU71734
Location: 9895-10794

BlastP hit with rmlD
Percentage identity: 96 %
BlastP bit score: 602
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlD
glucose-1-phosphate thymidylyltransferase
Accession: AQU71733
Location: 8959-9837

BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 596
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession: AQU71732
Location: 8421-8954

BlastP hit with rmlC
Percentage identity: 68 %
BlastP bit score: 242
Sequence coverage: 96 %
E-value: 4e-78

NCBI BlastP on this gene
rmlC
O-antigen transporter Wzx
Accession: AQU71731
Location: 7147-8424
NCBI BlastP on this gene
wzx
UDP-N-acetylglucosamine 2-epimerase
Accession: AQU71730
Location: 6002-7135
NCBI BlastP on this gene
mnaA
glycosyl transferase
Accession: AQU71729
Location: 4861-5934
NCBI BlastP on this gene
wekM
O-antigen polymerase
Accession: AQU71728
Location: 3650-4669
NCBI BlastP on this gene
wzy
glycosyl transferase family protein
Accession: AQU71727
Location: 2710-3675

BlastP hit with wbwV
Percentage identity: 35 %
BlastP bit score: 164
Sequence coverage: 100 %
E-value: 2e-44

NCBI BlastP on this gene
AQU71727
galactosyltransferase WbgM
Accession: AQU71726
Location: 1563-2708
NCBI BlastP on this gene
wbgM
hypothetical protein
Accession: AQU71725
Location: 144-980
NCBI BlastP on this gene
AQU71725
Query: Escherichia coli strain O146 O antigen gene cluster, complete
KY115223 : Escherichia coli O1:H12 O1-variant O-antigen gene cluster    Total score: 6.5     Cumulative Blast bit score: 2216
Hit cluster cross-links:   
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
dTDP-glucose-4,6-dehydratase
Accession: AQU71724
Location: 9516-10601

BlastP hit with rmlB
Percentage identity: 98 %
BlastP bit score: 612
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlB
dTDP-4-dehydrorhamnose reductase
Accession: AQU71723
Location: 8617-9516

BlastP hit with rmlD
Percentage identity: 96 %
BlastP bit score: 602
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlD
glucose-1-phosphate thymidylyltransferase
Accession: AQU71722
Location: 7681-8559

BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 596
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession: AQU71721
Location: 7143-7676

BlastP hit with rmlC
Percentage identity: 68 %
BlastP bit score: 242
Sequence coverage: 96 %
E-value: 4e-78

NCBI BlastP on this gene
rmlC
O-antigen transporter
Accession: AQU71720
Location: 5869-7146
NCBI BlastP on this gene
wzx
UDP-N-acetylglucosamine 2-epimerase
Accession: AQU71719
Location: 4724-5857
NCBI BlastP on this gene
mnaA
hypothetical protein
Accession: AQU71718
Location: 3583-4656
NCBI BlastP on this gene
wekM
O-antigen polymerase
Accession: AQU71717
Location: 2372-3391
NCBI BlastP on this gene
wzy
glycosyl transferase family protein
Accession: AQU71716
Location: 1432-2397

BlastP hit with wbwV
Percentage identity: 35 %
BlastP bit score: 164
Sequence coverage: 100 %
E-value: 2e-44

NCBI BlastP on this gene
AQU71716
galactosyltransferase
Accession: AQU71715
Location: 285-1430
NCBI BlastP on this gene
wbgM
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP028192 : Escherichia coli strain CFSAN018748 chromosome    Total score: 6.5     Cumulative Blast bit score: 2214
Hit cluster cross-links:   
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid biosynthesis glycosyltransferase WcaL
Accession: AVS47392
Location: 2353153-2354373
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession: AVS47393
Location: 2354384-2355778
NCBI BlastP on this gene
C7A99_11875
UTP--glucose-1-phosphate uridylyltransferase
Accession: AVS47394
Location: 2355953-2356846
NCBI BlastP on this gene
C7A99_11880
hypothetical protein
Accession: AVS47395
Location: 2356882-2357145
NCBI BlastP on this gene
C7A99_11885
dTDP-glucose 4,6-dehydratase
Accession: AVS47396
Location: 2357217-2358302

BlastP hit with rmlB
Percentage identity: 98 %
BlastP bit score: 616
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession: AVS47397
Location: 2358302-2359201

BlastP hit with rmlD
Percentage identity: 95 %
BlastP bit score: 595
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
C7A99_11895
glucose-1-phosphate thymidylyltransferase RfbA
Accession: AVS47398
Location: 2359259-2360137

BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 597
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
C7A99_11900
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession: AVS47399
Location: 2360142-2360675

BlastP hit with rmlC
Percentage identity: 68 %
BlastP bit score: 242
Sequence coverage: 96 %
E-value: 4e-78

NCBI BlastP on this gene
rfbC
flippase
Accession: AVS47400
Location: 2360660-2361949
NCBI BlastP on this gene
C7A99_11910
UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)
Accession: AVS47401
Location: 2361961-2363094
NCBI BlastP on this gene
C7A99_11915
glycosyl transferase family 2
Accession: AVS47402
Location: 2363162-2364235
NCBI BlastP on this gene
C7A99_11920
EpsG family protein
Accession: AVS47403
Location: 2364427-2365446
NCBI BlastP on this gene
C7A99_11925
glycosyltransferase family 2 protein
Accession: AVS47404
Location: 2365421-2366386

BlastP hit with wbwV
Percentage identity: 35 %
BlastP bit score: 164
Sequence coverage: 100 %
E-value: 2e-44

NCBI BlastP on this gene
C7A99_11930
glycosyltransferase family 1 protein
Accession: AVS47405
Location: 2366388-2367533
NCBI BlastP on this gene
C7A99_11935
phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating)
Accession: AVS47406
Location: 2367768-2369174
NCBI BlastP on this gene
C7A99_11940
hypothetical protein
Accession: AVS47407
Location: 2369193-2369414
NCBI BlastP on this gene
C7A99_11945
IS200/IS605 family transposase
Accession: AVS47408
Location: 2369320-2369829
NCBI BlastP on this gene
C7A99_11950
Query: Escherichia coli strain O146 O antigen gene cluster, complete
KY115225 : Escherichia coli O1:H20 O1-variant O-antigen gene cluster    Total score: 6.5     Cumulative Blast bit score: 2213
Hit cluster cross-links:   
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
UTP--glucose-1-phosphate uridylyltransferase subunit GalF
Accession: AQU71747
Location: 12252-12848
NCBI BlastP on this gene
galF
dTDP-glucose-4,6-dehydratase
Accession: AQU71746
Location: 10794-11879

BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 609
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlB
dTDP-4-dehydrorhamnose reductase
Accession: AQU71745
Location: 9895-10794

BlastP hit with rmlD
Percentage identity: 96 %
BlastP bit score: 602
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlD
glucose-1-phosphate thymidylyltransferase
Accession: AQU71744
Location: 8959-9837

BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 596
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession: AQU71743
Location: 8421-8954

BlastP hit with rmlC
Percentage identity: 68 %
BlastP bit score: 242
Sequence coverage: 96 %
E-value: 4e-78

NCBI BlastP on this gene
rmlC
O-antigen transporter Wzx
Accession: AQU71742
Location: 7147-8424
NCBI BlastP on this gene
wzx
UDP-N-acetylglucosamine 2-epimerase
Accession: AQU71741
Location: 6002-7135
NCBI BlastP on this gene
mnaA
hypothetical protein
Accession: AQU71740
Location: 4861-5934
NCBI BlastP on this gene
AQU71740
O-antigen polymerase
Accession: AQU71739
Location: 3650-4669
NCBI BlastP on this gene
wzy
glycerol-3-phosphate cytidylyltransferase
Accession: AQU71738
Location: 2710-3675

BlastP hit with wbwV
Percentage identity: 35 %
BlastP bit score: 164
Sequence coverage: 100 %
E-value: 2e-44

NCBI BlastP on this gene
AQU71738
galactosyltransferase WbgM
Accession: AQU71737
Location: 1563-2765
NCBI BlastP on this gene
wbgM
hypothetical protein
Accession: AQU71736
Location: 1219-1419
NCBI BlastP on this gene
AQU71736
Query: Escherichia coli strain O146 O antigen gene cluster, complete
KJ778804 : Escherichia coli strain P 9b serotype O69:K-:H38 O-antigen gene cluster    Total score: 6.5     Cumulative Blast bit score: 2208
Hit cluster cross-links:   
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
dTDP-glucose 4,6-dehydratase
Accession: AIG62806
Location: 108-1193

BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 612
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlB
dTDP-4-dehydrorhamnose reductase
Accession: AIG62805
Location: 1193-2092

BlastP hit with rmlD
Percentage identity: 96 %
BlastP bit score: 601
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlD
glucose-1-phosphate thymidylyltransferase
Accession: AIG62804
Location: 2150-3028

BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 597
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession: AIG62803
Location: 3033-3578

BlastP hit with rmlC
Percentage identity: 64 %
BlastP bit score: 236
Sequence coverage: 99 %
E-value: 2e-75

NCBI BlastP on this gene
rmlC
coenzyme F420-reducing hydrogenase subunit beta
Accession: AIG62802
Location: 3596-4951
NCBI BlastP on this gene
AIG62802
O-antigen flippase
Accession: AIG62801
Location: 4956-6470
NCBI BlastP on this gene
wzx
polysaccharide pyruvyl transferase
Accession: AIG62800
Location: 6467-7600
NCBI BlastP on this gene
AIG62800
glycosyl transferase family 2
Accession: AIG62799
Location: 7605-8489
NCBI BlastP on this gene
wfgH
O-antigen polymerase
Accession: AIG62798
Location: 8518-9633
NCBI BlastP on this gene
wzy
glycosyl transferase family 2
Accession: AIG62797
Location: 9653-10561

BlastP hit with wbwV
Percentage identity: 35 %
BlastP bit score: 162
Sequence coverage: 99 %
E-value: 1e-43

NCBI BlastP on this gene
AIG62797
glycosyl transferase
Accession: AIG62796
Location: 10564-11712
NCBI BlastP on this gene
epsD
acyltransferase family protein
Accession: AIG62795
Location: 11732-12715
NCBI BlastP on this gene
AIG62795
Query: Escherichia coli strain O146 O antigen gene cluster, complete
AB812028 : Escherichia coli genes for O-antigen biosynthetic locus    Total score: 6.5     Cumulative Blast bit score: 2208
Hit cluster cross-links:   
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid biosynthesis protein
Accession: BAQ01159
Location: 1-906
NCBI BlastP on this gene
wcaM
UTP-glucose-1-phosphate uridylyltransferase
Accession: BAQ01160
Location: 1069-1974
NCBI BlastP on this gene
galF
dTDP-glucose 4,6 dehydratase
Accession: BAQ01161
Location: 2346-3431

BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 612
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlB
dTDP-4-dehydrorhamnose reductase
Accession: BAQ01162
Location: 3431-4330

BlastP hit with rmlD
Percentage identity: 96 %
BlastP bit score: 601
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlD
glucose-1-phosphate thymidylyltransferase
Accession: BAQ01163
Location: 4388-5266

BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 597
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession: BAQ01164
Location: 5271-5816

BlastP hit with rmlC
Percentage identity: 64 %
BlastP bit score: 236
Sequence coverage: 99 %
E-value: 2e-75

NCBI BlastP on this gene
rmlC
putative coenzyme F420 hydrogenase/dehydrogenae beta subunit
Accession: BAQ01165
Location: 5834-7189
NCBI BlastP on this gene
BAQ01165
O-antigen flippase
Accession: BAQ01166
Location: 7194-8708
NCBI BlastP on this gene
wzx
putative pyruvyl transferase
Accession: BAQ01167
Location: 8705-9838
NCBI BlastP on this gene
BAQ01167
putative glycosyltransferase
Accession: BAQ01168
Location: 9843-10727
NCBI BlastP on this gene
BAQ01168
O-antigen polymerase
Accession: BAQ01169
Location: 10756-11871
NCBI BlastP on this gene
wzy
putative glycosyltransferase
Accession: BAQ01170
Location: 11891-12799

BlastP hit with wbwV
Percentage identity: 35 %
BlastP bit score: 162
Sequence coverage: 99 %
E-value: 2e-43

NCBI BlastP on this gene
BAQ01170
putative glycosyltransferase
Accession: BAQ01171
Location: 12802-13950
NCBI BlastP on this gene
BAQ01171
putative acetyltransferase
Accession: BAQ01172
Location: 13970-14995
NCBI BlastP on this gene
BAQ01172
6-phosphogluconate dehydrogenase
Accession: BAQ01173
Location: 15134-16540
NCBI BlastP on this gene
gnd
Query: Escherichia coli strain O146 O antigen gene cluster, complete
AB812052 : Escherichia coli genes for O-antigen biosynthetic locus    Total score: 6.5     Cumulative Blast bit score: 2204
Hit cluster cross-links:   
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
transposase of ISEc27
Accession: BAQ01574
Location: 1784-2194
NCBI BlastP on this gene
BAQ01574
UDP-N-acetylglucosamine 4-epimerase
Accession: BAQ01575
Location: 2357-3352
NCBI BlastP on this gene
gne
UTP-glucose-1-phosphate uridylyltransferase
Accession: BAQ01576
Location: 3595-4488
NCBI BlastP on this gene
galF
hypothetical protein
Accession: BAQ01577
Location: 4525-4788
NCBI BlastP on this gene
BAQ01577
dTDP-glucose 4,6 dehydratase
Accession: BAQ01578
Location: 4861-5946

BlastP hit with rmlB
Percentage identity: 98 %
BlastP bit score: 611
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlB
dTDP-4-dehydrorhamnose reductase
Accession: BAQ01579
Location: 5946-6845

BlastP hit with rmlD
Percentage identity: 97 %
BlastP bit score: 603
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlD
glucose-1-phosphate thymidylyltransferase
Accession: BAQ01580
Location: 6903-7781

BlastP hit with rmlA
Percentage identity: 99 %
BlastP bit score: 600
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession: BAQ01581
Location: 7786-8346

BlastP hit with rmlC
Percentage identity: 66 %
BlastP bit score: 239
Sequence coverage: 96 %
E-value: 7e-77

NCBI BlastP on this gene
rmlC
O-antigen flippase
Accession: BAQ01582
Location: 8359-9840
NCBI BlastP on this gene
wzx
putative glycosyltransferase
Accession: BAQ01583
Location: 9837-10682
NCBI BlastP on this gene
BAQ01583
O-antigen polymerase
Accession: BAQ01584
Location: 10666-11925
NCBI BlastP on this gene
wzy
putative glycosyltransferase
Accession: BAQ01585
Location: 11927-12718
NCBI BlastP on this gene
BAQ01585
putative glycosyltransferase
Accession: BAQ01586
Location: 12693-13613

BlastP hit with wbwV
Percentage identity: 35 %
BlastP bit score: 151
Sequence coverage: 95 %
E-value: 1e-39

NCBI BlastP on this gene
BAQ01586
putative glycosyltransferase
Accession: BAQ01587
Location: 13625-14728
NCBI BlastP on this gene
BAQ01587
6-phosphogluconate dehydrogenase
Accession: BAQ01588
Location: 14886-16292
NCBI BlastP on this gene
gnd
UDP-glucose 6-dehydrogenase
Accession: BAQ01589
Location: 16541-17707
NCBI BlastP on this gene
ugd
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP015240 : Escherichia coli strain 2011C-3911    Total score: 6.5     Cumulative Blast bit score: 2199
Hit cluster cross-links:   
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid biosynthesis glycosyltransferase WcaL
Accession: ANE58343
Location: 129503-130723
NCBI BlastP on this gene
A5956_00725
colanic acid biosynthesis protein WcaM
Accession: ANE58342
Location: 128098-129492
NCBI BlastP on this gene
wcaM
GalU regulator GalF
Accession: ANE58341
Location: 127030-127923
NCBI BlastP on this gene
A5956_00715
dTDP-glucose 4,6-dehydratase
Accession: ANE58340
Location: 125572-126657

BlastP hit with rmlB
Percentage identity: 98 %
BlastP bit score: 612
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
A5956_00710
dTDP-4-dehydrorhamnose reductase
Accession: ANE58339
Location: 124673-125572

BlastP hit with rmlD
Percentage identity: 94 %
BlastP bit score: 590
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
A5956_00705
glucose-1-phosphate thymidylyltransferase
Accession: ANE58338
Location: 123737-124615

BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 593
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
A5956_00700
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession: ANE58337
Location: 123187-123732

BlastP hit with rmlC
Percentage identity: 68 %
BlastP bit score: 246
Sequence coverage: 97 %
E-value: 1e-79

NCBI BlastP on this gene
A5956_00695
hypothetical protein
Accession: ANE58336
Location: 121975-123090
NCBI BlastP on this gene
A5956_00690
hypothetical protein
Accession: ANE58335
Location: 120994-121935
NCBI BlastP on this gene
A5956_00685
hypothetical protein
Accession: ANE58334
Location: 119908-120990
NCBI BlastP on this gene
A5956_00680
hypothetical protein
Accession: ANE58333
Location: 118626-119906
NCBI BlastP on this gene
A5956_00675
hypothetical protein
Accession: ANE58332
Location: 117727-118617
NCBI BlastP on this gene
A5956_00670
hypothetical protein
Accession: ANE58331
Location: 116772-117665

BlastP hit with wbwV
Percentage identity: 31 %
BlastP bit score: 158
Sequence coverage: 100 %
E-value: 2e-42

NCBI BlastP on this gene
A5956_00665
glycosyl hydrolase family 1
Accession: ANE58330
Location: 115681-116775
NCBI BlastP on this gene
A5956_00660
phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating)
Accession: ANE58329
Location: 114137-115543
NCBI BlastP on this gene
A5956_00655
UDP-glucose 6-dehydrogenase
Accession: ANE58328
Location: 112722-113888
NCBI BlastP on this gene
A5956_00650
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP034738 : Escherichia coli strain L65 chromosome    Total score: 6.5     Cumulative Blast bit score: 2176
Hit cluster cross-links:   
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid biosynthesis protein WcaM
Accession: AZU84292
Location: 1285045-1286439
NCBI BlastP on this gene
wcaM
N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans, octacis-undecaprenol 4-epimerase
Accession: AZU84291
Location: 1283892-1284887
NCBI BlastP on this gene
EM854_06435
GalU regulator GalF
Accession: AZU84290
Location: 1282756-1283649
NCBI BlastP on this gene
galF
dTDP-glucose 4,6-dehydratase
Accession: AZU84289
Location: 1281299-1282384

BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 609
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession: AZU84288
Location: 1280400-1281299

BlastP hit with rmlD
Percentage identity: 94 %
BlastP bit score: 591
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
EM854_06420
glucose-1-phosphate thymidylyltransferase RfbA
Accession: AZU84287
Location: 1279464-1280342

BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 595
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rfbA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession: AZU84286
Location: 1278905-1279459

BlastP hit with rmlC
Percentage identity: 67 %
BlastP bit score: 238
Sequence coverage: 96 %
E-value: 2e-76

NCBI BlastP on this gene
rfbC
EpsG family protein
Accession: AZU84285
Location: 1277720-1278841
NCBI BlastP on this gene
EM854_06405
glycosyltransferase family 2 protein
Accession: AZU84284
Location: 1276733-1277677
NCBI BlastP on this gene
EM854_06400
glycosyltransferase family 1 protein
Accession: AZU84283
Location: 1275634-1276725
NCBI BlastP on this gene
EM854_06395
hypothetical protein
Accession: AZU84282
Location: 1274376-1275641
NCBI BlastP on this gene
EM854_06390
hypothetical protein
Accession: AZU84281
Location: 1273491-1274339
NCBI BlastP on this gene
EM854_06385
rhamnosyltransferase
Accession: AZU87397
Location: 1272569-1273471

BlastP hit with wbwV
Percentage identity: 37 %
BlastP bit score: 143
Sequence coverage: 93 %
E-value: 1e-36

NCBI BlastP on this gene
EM854_06380
glycosyltransferase family 1 protein
Accession: AZU84280
Location: 1271454-1272557
NCBI BlastP on this gene
EM854_06375
NADP-dependent phosphogluconate dehydrogenase
Accession: AZU84279
Location: 1269890-1271296
NCBI BlastP on this gene
gndA
UDP-glucose 6-dehydrogenase
Accession: AZU84278
Location: 1268476-1269642
NCBI BlastP on this gene
EM854_06365
Query: Escherichia coli strain O146 O antigen gene cluster, complete
LC177551 : Escherichia coli DNA, O-antigen biosynthesis gene cluster OgN14, strain: E167.    Total score: 6.5     Cumulative Blast bit score: 2174
Hit cluster cross-links:   
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid biosynthesis protein
Accession: BAV90491
Location: 14-1408
NCBI BlastP on this gene
wcaM
UDP-N-acetylglucosamine 4-epimerase
Accession: BAV90492
Location: 1566-2561
NCBI BlastP on this gene
gne
UTP-glucose-1-phosphate uridylyltransferase
Accession: BAV90493
Location: 2793-3686
NCBI BlastP on this gene
galF
dTDP-glucose 4,6 dehydratase
Accession: BAV90494
Location: 4058-5143

BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 609
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlB
dTDP-4-dehydrorhamnose reductase
Accession: BAV90495
Location: 5143-6042

BlastP hit with rmlD
Percentage identity: 94 %
BlastP bit score: 592
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlD
glucose-1-phosphate thymidylyltransferase
Accession: BAV90496
Location: 6100-6978

BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 595
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession: BAV90497
Location: 6983-7537

BlastP hit with rmlC
Percentage identity: 66 %
BlastP bit score: 236
Sequence coverage: 96 %
E-value: 1e-75

NCBI BlastP on this gene
rmlC
O-antigen polymerase
Accession: BAV90498
Location: 7568-8722
NCBI BlastP on this gene
wzy
putative glycosyltranslocase
Accession: BAV90499
Location: 8765-9709
NCBI BlastP on this gene
BAV90499
putative glycosyltranslocase
Accession: BAV90500
Location: 9717-10808
NCBI BlastP on this gene
BAV90500
O-antigen flippase
Accession: BAV90501
Location: 10801-12066
NCBI BlastP on this gene
wzx
putative glycosyltranslocase
Accession: BAV90502
Location: 12103-12951
NCBI BlastP on this gene
BAV90502
putative glycosyltranslocase
Accession: BAV90503
Location: 12962-13873

BlastP hit with wbwV
Percentage identity: 36 %
BlastP bit score: 142
Sequence coverage: 93 %
E-value: 3e-36

NCBI BlastP on this gene
BAV90503
putative glycosyltranslocase
Accession: BAV90504
Location: 13885-14988
NCBI BlastP on this gene
BAV90504
6-phosphogluconate dehydrogenase
Accession: BAV90505
Location: 15146-16552
NCBI BlastP on this gene
gnd
UDP-glucose 6-dehydrogenase
Accession: BAV90506
Location: 16774-17967
NCBI BlastP on this gene
ugd
Query: Escherichia coli strain O146 O antigen gene cluster, complete
DQ109551 : Escherichia coli O138 O-antigen gene cluster    Total score: 5.5     Cumulative Blast bit score: 2059
Hit cluster cross-links:   
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
dTDP-glucose 4,6-dehydratase
Accession: AAZ85703
Location: 1137-2222

BlastP hit with rmlB
Percentage identity: 98 %
BlastP bit score: 617
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlB
dTDP-6-deoxy-L-mannose-dehydrogenase
Accession: AAZ85704
Location: 2222-3121

BlastP hit with rmlD
Percentage identity: 96 %
BlastP bit score: 600
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlD
glucose-1-phosphate thymidylyltransferase
Accession: AAZ85705
Location: 3179-4057

BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 597
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Accession: AAZ85706
Location: 4062-4598

BlastP hit with rmlC
Percentage identity: 66 %
BlastP bit score: 245
Sequence coverage: 100 %
E-value: 3e-79

NCBI BlastP on this gene
rmlC
O-antigen flippase
Accession: AAZ85707
Location: 4632-5909
NCBI BlastP on this gene
wzx
glycosyltransferase
Accession: AAZ85708
Location: 5899-6855
NCBI BlastP on this gene
wfaF
glycosyltransferase
Accession: AAZ85709
Location: 6848-7924
NCBI BlastP on this gene
wfaG
UDP-N-acetyl-D-galactosamine dehydrogenase
Accession: AAZ85710
Location: 7985-9262
NCBI BlastP on this gene
gna
GlcNAc-4-epimerase
Accession: AAZ85711
Location: 9264-10289
NCBI BlastP on this gene
gne
glycosyltransferase
Accession: AAZ85712
Location: 10333-11484
NCBI BlastP on this gene
wfaH
Query: Escherichia coli strain O146 O antigen gene cluster, complete
LC177550 : Escherichia coli DNA, O-antigen biosynthesis gene cluster OgN13, strain: E1682.    Total score: 5.5     Cumulative Blast bit score: 2058
Hit cluster cross-links:   
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid biosynthesis protein
Accession: BAV90473
Location: 14-1408
NCBI BlastP on this gene
wcaM
UTP-glucose-1-phosphate uridylyltransferase
Accession: BAV90474
Location: 1571-2476
NCBI BlastP on this gene
galF
dTDP-glucose 4,6 dehydratase
Accession: BAV90475
Location: 2847-3932

BlastP hit with rmlB
Percentage identity: 98 %
BlastP bit score: 614
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlB
dTDP-4-dehydrorhamnose reductase
Accession: BAV90476
Location: 3932-4831

BlastP hit with rmlD
Percentage identity: 97 %
BlastP bit score: 607
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlD
glucose-1-phosphate thymidylyltransferase
Accession: BAV90477
Location: 4889-5767

BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 595
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession: BAV90478
Location: 5772-6305

BlastP hit with rmlC
Percentage identity: 68 %
BlastP bit score: 242
Sequence coverage: 96 %
E-value: 4e-78

NCBI BlastP on this gene
rmlC
putative glycosyltranslocase
Accession: BAV90479
Location: 6314-7177
NCBI BlastP on this gene
BAV90479
O-antigen flippase
Accession: BAV90480
Location: 7164-8363
NCBI BlastP on this gene
wzx
putative glycosyltranslocase
Accession: BAV90481
Location: 8366-9139
NCBI BlastP on this gene
BAV90481
O-antigen polymerase
Accession: BAV90482
Location: 9136-10203
NCBI BlastP on this gene
wzy
putative glycosyltranslocase
Accession: BAV90483
Location: 10200-11042
NCBI BlastP on this gene
BAV90483
putative glycosyltranslocase
Accession: BAV90484
Location: 11039-11779
NCBI BlastP on this gene
BAV90484
putative glycosyltranslocase
Accession: BAV90485
Location: 11767-12909
NCBI BlastP on this gene
BAV90485
Query: Escherichia coli strain O146 O antigen gene cluster, complete
LC125928 : Escherichia coli DNA, O-antigen biosynthesis gene cluster, strain: 102755.    Total score: 5.5     Cumulative Blast bit score: 2057
Hit cluster cross-links:   
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid biosynthesis protein
Accession: BAU71565
Location: 468-1862
NCBI BlastP on this gene
wcaM
UTP-glucose-1-phosphate uridylyltransferase
Accession: BAU71566
Location: 2025-2930
NCBI BlastP on this gene
galF
dTDP-glucose 4,6 dehydratase
Accession: BAU71567
Location: 3302-4387

BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 611
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlB
dTDP-4-dehydrorhamnose reductase
Accession: BAU71568
Location: 4387-5286

BlastP hit with rmlD
Percentage identity: 97 %
BlastP bit score: 604
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlD
glucose-1-phosphate thymidylyltransferase
Accession: BAU71569
Location: 5344-6222

BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 597
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession: BAU71570
Location: 6227-6775

BlastP hit with rmlC
Percentage identity: 69 %
BlastP bit score: 245
Sequence coverage: 96 %
E-value: 4e-79

NCBI BlastP on this gene
rmlC
O-antigen flippase
Accession: BAU71571
Location: 6783-8063
NCBI BlastP on this gene
wzx
O-antigen polymerase
Accession: BAU71572
Location: 8032-9201
NCBI BlastP on this gene
wzy
putative glycosyltranslocase
Accession: BAU71573
Location: 9194-10336
NCBI BlastP on this gene
BAU71573
putative glycosyltranslocase
Accession: BAU71574
Location: 10340-11371
NCBI BlastP on this gene
BAU71574
putative glycosyltranslocase
Accession: BAU71575
Location: 11368-12450
NCBI BlastP on this gene
BAU71575
putative glycosyltranslocase
Accession: BAU71576
Location: 12459-13229
NCBI BlastP on this gene
BAU71576
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP047576 : Escherichia coli strain 94EC chromosome    Total score: 5.5     Cumulative Blast bit score: 2056
Hit cluster cross-links:   
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
M-antigen undecaprenyl disphosphate flippase
Accession: QHI55064
Location: 4600597-4602075
NCBI BlastP on this gene
wzxC
colanic acid biosynthesis pyruvyl transferase WcaK
Accession: QHI55065
Location: 4602255-4603535
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession: QHI55066
Location: 4603532-4604752
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession: QHI55067
Location: 4604763-4606157
NCBI BlastP on this gene
wcaM
UTP--glucose-1-phosphate uridylyltransferase GalF
Accession: QHI55068
Location: 4606332-4607225
NCBI BlastP on this gene
galF
dTDP-glucose 4,6-dehydratase
Accession: QHI55069
Location: 4607597-4608682

BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 610
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession: QHI55070
Location: 4608682-4609581

BlastP hit with rmlD
Percentage identity: 97 %
BlastP bit score: 607
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rfbD
glucose-1-phosphate thymidylyltransferase RfbA
Accession: QHI55071
Location: 4609639-4610517

BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 597
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rfbA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession: QHI55072
Location: 4610522-4611055

BlastP hit with rmlC
Percentage identity: 68 %
BlastP bit score: 242
Sequence coverage: 96 %
E-value: 4e-78

NCBI BlastP on this gene
rfbC
hypothetical protein
Accession: QHI55073
Location: 4611064-4611927
NCBI BlastP on this gene
GUJ28_21955
oligosaccharide flippase family protein
Accession: QHI55074
Location: 4611914-4613113
NCBI BlastP on this gene
GUJ28_21960
DUF616 domain-containing protein
Accession: QHI55435
Location: 4613128-4613889
NCBI BlastP on this gene
GUJ28_21965
hypothetical protein
Accession: QHI55075
Location: 4614006-4614953
NCBI BlastP on this gene
GUJ28_21970
glycosyltransferase
Accession: QHI55076
Location: 4614953-4615792
NCBI BlastP on this gene
GUJ28_21975
glycosyltransferase
Accession: QHI55077
Location: 4615804-4616529
NCBI BlastP on this gene
GUJ28_21980
glycosyltransferase
Accession: QHI55078
Location: 4616517-4617659
NCBI BlastP on this gene
GUJ28_21985
Query: Escherichia coli strain O146 O antigen gene cluster, complete
KJ778803 : Escherichia coli strain H 304 serotype O34:H10 O-antigen gene cluster    Total score: 5.5     Cumulative Blast bit score: 2054
Hit cluster cross-links:   
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
dTDP-glucose 4,6-dehydratase
Accession: AIG62782
Location: 117-1202

BlastP hit with rmlB
Percentage identity: 98 %
BlastP bit score: 614
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlB
dTDP-4-dehydrorhamnose reductase
Accession: AIG62783
Location: 1202-2101

BlastP hit with rmlD
Percentage identity: 98 %
BlastP bit score: 608
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlD
glucose-1-phosphate thymidylyltransferase 1
Accession: AIG62784
Location: 2159-3037

BlastP hit with rmlA
Percentage identity: 96 %
BlastP bit score: 588
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession: AIG62785
Location: 3042-3587

BlastP hit with rmlC
Percentage identity: 65 %
BlastP bit score: 244
Sequence coverage: 100 %
E-value: 1e-78

NCBI BlastP on this gene
rmlC
O-antigen flippase
Accession: AIG62786
Location: 3589-4845
NCBI BlastP on this gene
wzx
UDP-galactopyranose mutase
Accession: AIG62787
Location: 4848-5930
NCBI BlastP on this gene
glf
hypothetical protein
Accession: AIG62788
Location: 5940-6932
NCBI BlastP on this gene
AIG62788
O-antigen polymerase
Accession: AIG62789
Location: 6967-7989
NCBI BlastP on this gene
wzy
UDP-Glc:alpha-D-GlcNAc-diphosphoundecaprenol beta-1,3-glucosyltransferase
Accession: AIG62790
Location: 7986-8927
NCBI BlastP on this gene
wfgD
N-acetylgalactosamine-N,
Accession: AIG62791
Location: 8915-10024
NCBI BlastP on this gene
pglJ
Query: Escherichia coli strain O146 O antigen gene cluster, complete
KJ778790 : Escherichia coli strain E 49 serotype O79:H40 O-antigen gene cluster    Total score: 5.5     Cumulative Blast bit score: 2054
Hit cluster cross-links:   
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
dTDP-glucose 4,6-dehydratase
Accession: AIG62643
Location: 107-1192

BlastP hit with rmlB
Percentage identity: 98 %
BlastP bit score: 611
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlB
dTDP-4-dehydrorhamnose reductase
Accession: AIG62644
Location: 1192-2091

BlastP hit with rmlD
Percentage identity: 98 %
BlastP bit score: 608
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlD
glucose-1-phosphate thymidylyltransferase 1
Accession: AIG62645
Location: 2149-3027

BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 595
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession: AIG62646
Location: 3032-3568

BlastP hit with rmlC
Percentage identity: 66 %
BlastP bit score: 240
Sequence coverage: 99 %
E-value: 3e-77

NCBI BlastP on this gene
rmlC
glycosyl transferase family 2
Accession: AIG62647
Location: 3583-4344
NCBI BlastP on this gene
wbdT
O-antigen polymerase
Accession: AIG62648
Location: 4348-5439
NCBI BlastP on this gene
wzy
glycosyl transferase
Accession: AIG62649
Location: 5432-6232
NCBI BlastP on this gene
wbdU
O-antigen flippase
Accession: AIG62650
Location: 6232-7392
NCBI BlastP on this gene
wzx
hypothetical protein
Accession: AIG62651
Location: 7376-7978
NCBI BlastP on this gene
wbdV
glycosyl transferase
Accession: AIG62652
Location: 7975-9057
NCBI BlastP on this gene
wbdW
glycosyl transferase family 2
Accession: AIG62653
Location: 9054-9815
NCBI BlastP on this gene
wbdX
mannose-1-phosphate guanylyltransferase
Accession: AIG62654
Location: 9827-11227
NCBI BlastP on this gene
manC
Query: Escherichia coli strain O146 O antigen gene cluster, complete
EU294162 : Escherichia coli serotype O79 O antigen gene cluster    Total score: 5.5     Cumulative Blast bit score: 2054
Hit cluster cross-links:   
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
RmlB
Accession: ACA24734
Location: 107-1192

BlastP hit with rmlB
Percentage identity: 98 %
BlastP bit score: 611
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlB
RmlD
Accession: ACA24735
Location: 1192-2091

BlastP hit with rmlD
Percentage identity: 98 %
BlastP bit score: 608
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlD
RmlA
Accession: ACA24736
Location: 2149-3027

BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 595
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlA
RmlC
Accession: ACA24737
Location: 3032-3568

BlastP hit with rmlC
Percentage identity: 66 %
BlastP bit score: 240
Sequence coverage: 99 %
E-value: 3e-77

NCBI BlastP on this gene
rmlC
WbdT
Accession: ACA24738
Location: 3583-4344
NCBI BlastP on this gene
wbdT
Wzy
Accession: ACA24739
Location: 4348-5439
NCBI BlastP on this gene
wzy
WbdU
Accession: ACA24740
Location: 5432-6232
NCBI BlastP on this gene
wbdU
Wzx
Accession: ACA24741
Location: 6232-7392
NCBI BlastP on this gene
wzx
WbdV
Accession: ACA24742
Location: 7376-7978
NCBI BlastP on this gene
wbdV
WbdW
Accession: ACA24743
Location: 7975-9057
NCBI BlastP on this gene
wbdW
WbdX
Accession: ACA24744
Location: 9054-9815
NCBI BlastP on this gene
wbdX
ManC
Accession: ACA24745
Location: 9827-11227
NCBI BlastP on this gene
manC
Query: Escherichia coli strain O146 O antigen gene cluster, complete
AB811612 : Escherichia coli DNA, O-antigen biosynthetic locus, strain: H304.    Total score: 5.5     Cumulative Blast bit score: 2054
Hit cluster cross-links:   
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
not annotated
Accession: BAQ00803
Location: 3-893
NCBI BlastP on this gene
wcaM
UTP-glucose-1-phosphate uridylyltransferase
Accession: BAQ00804
Location: 1056-1961
NCBI BlastP on this gene
galF
dTDP-glucose 4,6 dehydratase
Accession: BAQ00805
Location: 2333-3418

BlastP hit with rmlB
Percentage identity: 98 %
BlastP bit score: 614
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlB
dTDP-4-dehydrorhamnose reductase
Accession: BAQ00806
Location: 3418-4317

BlastP hit with rmlD
Percentage identity: 98 %
BlastP bit score: 608
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlD
glucose-1-phosphate thymidylyltransferase
Accession: BAQ00807
Location: 4375-5253

BlastP hit with rmlA
Percentage identity: 96 %
BlastP bit score: 588
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession: BAQ00808
Location: 5258-5803

BlastP hit with rmlC
Percentage identity: 65 %
BlastP bit score: 244
Sequence coverage: 100 %
E-value: 1e-78

NCBI BlastP on this gene
rmlC
O-antigen flippase
Accession: BAQ00809
Location: 5805-7061
NCBI BlastP on this gene
wzx
UDP-galactopyranose mutase
Accession: BAQ00810
Location: 7058-8146
NCBI BlastP on this gene
glf
hypothetical protein
Accession: BAQ00811
Location: 8156-9148
NCBI BlastP on this gene
BAQ00811
O-antigen polymerase
Accession: BAQ00812
Location: 9183-10205
NCBI BlastP on this gene
wzy
putative glycosyltransferase
Accession: BAQ00813
Location: 10202-11143
NCBI BlastP on this gene
BAQ00813
putative glycosyltransferase
Accession: BAQ00814
Location: 11131-12240
NCBI BlastP on this gene
BAQ00814
Query: Escherichia coli strain O146 O antigen gene cluster, complete
LR134191 : Escherichia coli strain NCTC5934 genome assembly, chromosome: 1.    Total score: 5.5     Cumulative Blast bit score: 2053
Hit cluster cross-links:   
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
putative flippase (Putative export protein)
Accession: VEB55911
Location: 1768564-1770042
NCBI BlastP on this gene
wzxC
Colanic acid biosynthesis protein
Accession: VEB55913
Location: 1770222-1771502
NCBI BlastP on this gene
wcaK
putative colanic acid biosynthesis glycosyltransferase
Accession: VEB55915
Location: 1771499-1772719
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein
Accession: VEB55917
Location: 1772730-1774124
NCBI BlastP on this gene
wcaM
UTP--glucose-1-phosphate uridylyltransferase subunit GalF
Accession: VEB55919
Location: 1774299-1775174
NCBI BlastP on this gene
galF
dTDP-D-glucose 4,6-dehydratase rmlB
Accession: VEB55921
Location: 1775565-1776650

BlastP hit with rmlB
Percentage identity: 98 %
BlastP bit score: 611
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlB
dTDP-4-dehydrorhamnose reductase
Accession: VEB55923
Location: 1776650-1777549

BlastP hit with rmlD
Percentage identity: 97 %
BlastP bit score: 607
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlD
glucose-1-phosphate thymidylyltransferase
Accession: VEB55925
Location: 1777607-1778485

BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 595
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rfbA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession: VEB55927
Location: 1778490-1779026

BlastP hit with rmlC
Percentage identity: 66 %
BlastP bit score: 240
Sequence coverage: 99 %
E-value: 3e-77

NCBI BlastP on this gene
rmlC
N-glycosyltransferase
Accession: VEB55929
Location: 1779041-1779802
NCBI BlastP on this gene
NCTC5934_01741
Uncharacterised protein
Accession: VEB55931
Location: 1779806-1780897
NCBI BlastP on this gene
NCTC5934_01742
Uncharacterised protein
Accession: VEB55933
Location: 1780890-1781690
NCBI BlastP on this gene
NCTC5934_01743
Uncharacterised protein
Accession: VEB55935
Location: 1781690-1782766
NCBI BlastP on this gene
NCTC5934_01744
Exopolysaccharide biosynthesis protein
Accession: VEB55937
Location: 1782835-1783365
NCBI BlastP on this gene
NCTC5934_01745
Uncharacterised protein
Accession: VEB55939
Location: 1784030-1784518
NCBI BlastP on this gene
NCTC5934_01746
Glycosyltransferase
Accession: VEB55941
Location: 1784515-1785276
NCBI BlastP on this gene
wbdN
putative mannose-1-phosphate guanylyltransferase
Accession: VEB55943
Location: 1785288-1786688
NCBI BlastP on this gene
rfbM
Query: Escherichia coli strain O146 O antigen gene cluster, complete
JN871614 : Escherichia coli strain R32_14_1F O antigen gene cluster    Total score: 5.5     Cumulative Blast bit score: 2053
Hit cluster cross-links:   
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
rmlB
Accession: AFD21088
Location: 189-1082

BlastP hit with rmlB
Percentage identity: 98 %
BlastP bit score: 611
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
AFD21088
rmlD
Accession: AFD21089
Location: 1082-1981

BlastP hit with rmlD
Percentage identity: 97 %
BlastP bit score: 602
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
AFD21089
rmlA
Accession: AFD21090
Location: 2039-2917

BlastP hit with rmlA
Percentage identity: 99 %
BlastP bit score: 598
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
AFD21090
rmlC
Accession: AFD21091
Location: 2922-3464

BlastP hit with rmlC
Percentage identity: 66 %
BlastP bit score: 242
Sequence coverage: 100 %
E-value: 4e-78

NCBI BlastP on this gene
AFD21091
wzx
Accession: AFD21092
Location: 3464-4726
NCBI BlastP on this gene
AFD21092
wzy
Accession: AFD21093
Location: 4792-5814
NCBI BlastP on this gene
AFD21093
wbuA
Accession: AFD21094
Location: 5830-6624
NCBI BlastP on this gene
AFD21094
fnl1
Accession: AFD21095
Location: 6636-7670
NCBI BlastP on this gene
AFD21095
fnl2
Accession: AFD21096
Location: 7654-8778
NCBI BlastP on this gene
AFD21096
fnl3
Accession: AFD21097
Location: 8793-9905
NCBI BlastP on this gene
AFD21097
Query: Escherichia coli strain O146 O antigen gene cluster, complete
JN871613 : Escherichia coli strain 94_0003 O antigen gene cluster    Total score: 5.5     Cumulative Blast bit score: 2053
Hit cluster cross-links:   
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
rmlB
Accession: AFD21076
Location: 189-1082

BlastP hit with rmlB
Percentage identity: 98 %
BlastP bit score: 611
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
AFD21076
rmlD
Accession: AFD21077
Location: 1082-1981

BlastP hit with rmlD
Percentage identity: 97 %
BlastP bit score: 602
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
AFD21077
rmlA
Accession: AFD21078
Location: 2039-2917

BlastP hit with rmlA
Percentage identity: 99 %
BlastP bit score: 598
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
AFD21078
rmlC
Accession: AFD21079
Location: 2922-3464

BlastP hit with rmlC
Percentage identity: 66 %
BlastP bit score: 242
Sequence coverage: 100 %
E-value: 4e-78

NCBI BlastP on this gene
AFD21079
wzx
Accession: AFD21080
Location: 3464-4726
NCBI BlastP on this gene
AFD21080
wzy
Accession: AFD21081
Location: 4792-5814
NCBI BlastP on this gene
AFD21081
wbuA
Accession: AFD21082
Location: 5830-6624
NCBI BlastP on this gene
AFD21082
fnl1
Accession: AFD21083
Location: 6636-7670
NCBI BlastP on this gene
AFD21083
fnl2
Accession: AFD21084
Location: 7654-8778
NCBI BlastP on this gene
AFD21084
fnl3
Accession: AFD21085
Location: 8793-9905
NCBI BlastP on this gene
AFD21085
Query: Escherichia coli strain O146 O antigen gene cluster, complete
MN172356 : Escherichia coli strain 16-04178 O-antigen biosynthesis gene cluster    Total score: 5.5     Cumulative Blast bit score: 2052
Hit cluster cross-links:   
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
GalF
Accession: QEE84054
Location: 79-972
NCBI BlastP on this gene
galF
RmlB
Accession: QEE84055
Location: 1345-2430

BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 610
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlB
RmlD
Accession: QEE84056
Location: 2430-3329

BlastP hit with rmlD
Percentage identity: 97 %
BlastP bit score: 605
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlD
RmlA
Accession: QEE84057
Location: 3387-4265

BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 594
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession: QEE84058
Location: 4270-4809

BlastP hit with rmlC
Percentage identity: 69 %
BlastP bit score: 243
Sequence coverage: 93 %
E-value: 2e-78

NCBI BlastP on this gene
QEE84058
DUF616 domain-containing protein
Accession: QEE84059
Location: 4826-5572
NCBI BlastP on this gene
QEE84059
EpsG family protein
Accession: QEE84060
Location: 5573-6553
NCBI BlastP on this gene
wzy
glycosyltransferase
Accession: QEE84061
Location: 6561-7397
NCBI BlastP on this gene
QEE84061
glycosyltransferase family 1 protein
Accession: QEE84062
Location: 7399-8400
NCBI BlastP on this gene
QEE84062
glycosyltransferase family 2 protein
Accession: QEE84063
Location: 8390-9184
NCBI BlastP on this gene
QEE84063
Gnd
Accession: QEE84064
Location: 9298-10704
NCBI BlastP on this gene
gnd
flippase
Accession: QEE84065
Location: 10840-12126
NCBI BlastP on this gene
wzx
Query: Escherichia coli strain O146 O antigen gene cluster, complete
KY115226 : Escherichia coli O1:H- hypothetical protein gene    Total score: 5.5     Cumulative Blast bit score: 2052
Hit cluster cross-links:   
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
UTP--glucose-1-phosphate uridylyltransferase
Accession: AQU71761
Location: 16613-17209
NCBI BlastP on this gene
galF
dTDP-glucose 4,6-dehydratase
Accession: AQU71760
Location: 15156-16241

BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 612
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlB
dTDP-4-dehydrorhamnose reductase
Accession: AQU71759
Location: 14257-15156

BlastP hit with rmlD
Percentage identity: 96 %
BlastP bit score: 601
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlD
glucose-1-phosphate thymidylyltransferase
Accession: AQU71758
Location: 13321-14199

BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 597
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession: AQU71757
Location: 12783-13316

BlastP hit with rmlC
Percentage identity: 67 %
BlastP bit score: 242
Sequence coverage: 96 %
E-value: 4e-78

NCBI BlastP on this gene
rmlC
O-antigen flippase
Accession: AQU71756
Location: 11509-12786
NCBI BlastP on this gene
wzx
UDP-N-acetylglucosamine 2-epimerase
Accession: AQU71755
Location: 10361-11497
NCBI BlastP on this gene
mnaA
hypothetical protein
Accession: AQU71754
Location: 9222-10295
NCBI BlastP on this gene
AQU71754
glycosyl transferase family 2
Accession: AQU71753
Location: 6952-7872
NCBI BlastP on this gene
AQU71753
O-antigen polymerase
Accession: AQU71752
Location: 5830-6873
NCBI BlastP on this gene
wzy
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP048025 : Escherichia coli strain GZEC065 chromosome    Total score: 5.5     Cumulative Blast bit score: 2052
Hit cluster cross-links:   
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid biosynthesis pyruvyl transferase WcaK
Accession: QHS05198
Location: 1252927-1254207
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession: QHS05197
Location: 1251710-1252930
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession: QHS05196
Location: 1250305-1251699
NCBI BlastP on this gene
wcaM
N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans, octacis-undecaprenol 4-epimerase
Accession: QHS05195
Location: 1249152-1250147
NCBI BlastP on this gene
GWG09_06190
UTP--glucose-1-phosphate uridylyltransferase GalF
Accession: QHS05194
Location: 1248016-1248909
NCBI BlastP on this gene
galF
dTDP-glucose 4,6-dehydratase
Accession: QHS05193
Location: 1246559-1247644

BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 611
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession: QHS05192
Location: 1245660-1246559

BlastP hit with rmlD
Percentage identity: 95 %
BlastP bit score: 600
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rfbD
glucose-1-phosphate thymidylyltransferase RfbA
Accession: QHS05191
Location: 1244724-1245602

BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 596
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rfbA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession: QHS05190
Location: 1244171-1244719

BlastP hit with rmlC
Percentage identity: 66 %
BlastP bit score: 245
Sequence coverage: 100 %
E-value: 3e-79

NCBI BlastP on this gene
rfbC
oligosaccharide repeat unit polymerase
Accession: QHS05189
Location: 1242913-1244142
NCBI BlastP on this gene
GWG09_06160
oligosaccharide flippase family protein
Accession: QHS05188
Location: 1241757-1242920
NCBI BlastP on this gene
GWG09_06155
glycosyltransferase family 2 protein
Accession: QHS05187
Location: 1240942-1241760
NCBI BlastP on this gene
GWG09_06150
hypothetical protein
Accession: QHS05186
Location: 1239777-1240667
NCBI BlastP on this gene
GWG09_06145
glycosyltransferase family 2 protein
Accession: QHS05185
Location: 1239007-1239759
NCBI BlastP on this gene
GWG09_06140
NADP-dependent phosphogluconate dehydrogenase
Accession: QHS05184
Location: 1237499-1238905
NCBI BlastP on this gene
gndA
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP043757 : Escherichia coli strain CVM N55972 chromosome    Total score: 5.5     Cumulative Blast bit score: 2052
Hit cluster cross-links:   
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid biosynthesis pyruvyl transferase WcaK
Accession: QEP88341
Location: 1770213-1771493
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession: QEP88342
Location: 1771490-1772710
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession: QEP88343
Location: 1772721-1774115
NCBI BlastP on this gene
wcaM
UTP--glucose-1-phosphate uridylyltransferase GalF
Accession: QEP88344
Location: 1774290-1775183
NCBI BlastP on this gene
galF
dTDP-glucose 4,6-dehydratase
Accession: QEP88345
Location: 1775555-1776640

BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 612
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession: QEP88346
Location: 1776640-1777539

BlastP hit with rmlD
Percentage identity: 96 %
BlastP bit score: 601
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rfbD
glucose-1-phosphate thymidylyltransferase RfbA
Accession: QEP88347
Location: 1777597-1778475

BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 597
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rfbA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession: QEP88348
Location: 1778480-1779013

BlastP hit with rmlC
Percentage identity: 67 %
BlastP bit score: 242
Sequence coverage: 96 %
E-value: 4e-78

NCBI BlastP on this gene
rfbC
oligosaccharide flippase family protein
Accession: QEP88349
Location: 1778998-1780287
NCBI BlastP on this gene
F1L16_08405
UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)
Accession: QEP88350
Location: 1780299-1781435
NCBI BlastP on this gene
F1L16_08410
glycosyltransferase family 4 protein
Accession: QEP88351
Location: 1782042-1782572
NCBI BlastP on this gene
F1L16_08415
ISAs1 family transposase
Accession: F1L16_08420
Location: 1782820-1783853
NCBI BlastP on this gene
F1L16_08420
glycosyltransferase family 2 protein
Accession: QEP88352
Location: 1783920-1784840
NCBI BlastP on this gene
F1L16_08425
EpsG family protein
Accession: F1L16_08430
Location: 1784919-1785961
NCBI BlastP on this gene
F1L16_08430
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP041435 : Escherichia coli strain STEC309 chromosome    Total score: 5.5     Cumulative Blast bit score: 2052
Hit cluster cross-links:   
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
M-antigen undecaprenyl disphosphate flippase
Accession: QHR26209
Location: 1844677-1846155
NCBI BlastP on this gene
wzxC
colanic acid biosynthesis pyruvyl transferase WcaK
Accession: QHR26210
Location: 1846335-1847615
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession: QHR26211
Location: 1847612-1848832
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession: QHR26212
Location: 1848843-1850237
NCBI BlastP on this gene
wcaM
UTP--glucose-1-phosphate uridylyltransferase GalF
Accession: QHR26213
Location: 1850412-1851305
NCBI BlastP on this gene
galF
dTDP-glucose 4,6-dehydratase
Accession: QHR26214
Location: 1851678-1852763

BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 610
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession: QHR26215
Location: 1852763-1853662

BlastP hit with rmlD
Percentage identity: 97 %
BlastP bit score: 605
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rfbD
glucose-1-phosphate thymidylyltransferase RfbA
Accession: QHR26216
Location: 1853720-1854598

BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 594
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rfbA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession: QHR26217
Location: 1854603-1855142

BlastP hit with rmlC
Percentage identity: 69 %
BlastP bit score: 243
Sequence coverage: 93 %
E-value: 2e-78

NCBI BlastP on this gene
rfbC
DUF616 domain-containing protein
Accession: QHR26218
Location: 1855129-1855905
NCBI BlastP on this gene
FNE81_08905
EpsG family protein
Accession: QHR26219
Location: 1855906-1856886
NCBI BlastP on this gene
FNE81_08910
glycosyltransferase
Accession: QHR26220
Location: 1856894-1857730
NCBI BlastP on this gene
FNE81_08915
glycosyltransferase
Accession: QHR26221
Location: 1857732-1858733
NCBI BlastP on this gene
FNE81_08920
glycosyltransferase family 2 protein
Accession: QHR26222
Location: 1858723-1859517
NCBI BlastP on this gene
FNE81_08925
NADP-dependent phosphogluconate dehydrogenase
Accession: QHR26223
Location: 1859631-1861037
NCBI BlastP on this gene
gndA
flippase
Accession: QHR26224
Location: 1861173-1862459
NCBI BlastP on this gene
FNE81_08935
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP032892 : Escherichia coli strain SCEC020022 chromosome    Total score: 5.5     Cumulative Blast bit score: 2052
Hit cluster cross-links:   
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
colanic acid biosynthesis pyruvyl transferase WcaK
Accession: AYL90913
Location: 1863391-1864671
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession: AYL90914
Location: 1864668-1865888
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession: AYL90915
Location: 1865899-1867293
NCBI BlastP on this gene
wcaM
N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans, octacis-undecaprenol 4-epimerase
Accession: AYL90916
Location: 1867451-1868446
NCBI BlastP on this gene
C7V31_12130
UTP--glucose-1-phosphate uridylyltransferase
Accession: AYL90917
Location: 1868689-1869582
NCBI BlastP on this gene
C7V31_12135
hypothetical protein
Accession: AYL90918
Location: 1869619-1869882
NCBI BlastP on this gene
C7V31_12140
dTDP-glucose 4,6-dehydratase
Accession: AYL90919
Location: 1869954-1871039

BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 611
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession: AYL90920
Location: 1871039-1871938

BlastP hit with rmlD
Percentage identity: 95 %
BlastP bit score: 600
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
C7V31_12150
glucose-1-phosphate thymidylyltransferase RfbA
Accession: AYL90921
Location: 1871996-1872874

BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 596
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rfbA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession: AYL90922
Location: 1872879-1873427

BlastP hit with rmlC
Percentage identity: 66 %
BlastP bit score: 245
Sequence coverage: 100 %
E-value: 3e-79

NCBI BlastP on this gene
rfbC
oligosaccharide repeat unit polymerase
Accession: AYL90923
Location: 1873456-1874685
NCBI BlastP on this gene
C7V31_12165
hypothetical protein
Accession: AYL90924
Location: 1874678-1875841
NCBI BlastP on this gene
C7V31_12170
glycosyltransferase family 2 protein
Accession: AYL90925
Location: 1875838-1876656
NCBI BlastP on this gene
C7V31_12175
hypothetical protein
Accession: AYL90926
Location: 1876662-1877822
NCBI BlastP on this gene
C7V31_12180
glycosyltransferase family 2 protein
Accession: AYL93662
Location: 1877840-1878592
NCBI BlastP on this gene
C7V31_12185
NADP-dependent phosphogluconate dehydrogenase
Accession: AYL90927
Location: 1878694-1880100
NCBI BlastP on this gene
gndA
Query: Escherichia coli strain O146 O antigen gene cluster, complete
AP021896 : Escherichia coli 2018.02.02CC DNA    Total score: 5.5     Cumulative Blast bit score: 2052
Hit cluster cross-links:   
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
lipopolysaccharide biosynthesis protein
Accession: BBP38140
Location: 1175372-1176850
NCBI BlastP on this gene
VEGS05_11440
colanic acid biosynthesis protein WcaK
Accession: BBP38139
Location: 1173816-1175096
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession: BBP38138
Location: 1172599-1173819
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession: BBP38137
Location: 1171194-1172588
NCBI BlastP on this gene
wcaM
UTP--glucose-1-phosphate uridylyltransferase
Accession: BBP38136
Location: 1170126-1171019
NCBI BlastP on this gene
galF
dTDP-glucose 4,6-dehydratase
Accession: BBP38135
Location: 1168669-1169754

BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 612
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rfbB
NAD(P)-dependent oxidoreductase
Accession: BBP38134
Location: 1167770-1168669

BlastP hit with rmlD
Percentage identity: 96 %
BlastP bit score: 601
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rfbD
glucose-1-phosphate thymidylyltransferase
Accession: BBP38133
Location: 1166834-1167712

BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 597
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession: BBP38132
Location: 1166296-1166829

BlastP hit with rmlC
Percentage identity: 67 %
BlastP bit score: 242
Sequence coverage: 96 %
E-value: 4e-78

NCBI BlastP on this gene
rfbC
teichoic acid transporter
Accession: BBP38131
Location: 1165022-1166269
NCBI BlastP on this gene
VEGS05_11350
UDP-N-acetyl glucosamine 2-epimerase
Accession: BBP38130
Location: 1163874-1165010
NCBI BlastP on this gene
VEGS05_11340
hypothetical protein
Accession: BBP38129
Location: 1162735-1163808
NCBI BlastP on this gene
VEGS05_11330
dTDP-rhamnosyl transferase RfbF
Accession: BBP38128
Location: 1160465-1161385
NCBI BlastP on this gene
rfbF
hypothetical protein
Accession: BBP38127
Location: 1159343-1160386
NCBI BlastP on this gene
VEGS05_11310
Query: Escherichia coli strain O146 O antigen gene cluster, complete
LR134092 : Escherichia coli strain NCTC10444 genome assembly, chromosome: 1.    Total score: 5.5     Cumulative Blast bit score: 2050
Hit cluster cross-links:   
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
putative flippase (Putative export protein)
Accession: VDZ30734
Location: 1930052-1931530
NCBI BlastP on this gene
wzxC
Colanic acid biosynthesis protein
Accession: VDZ30735
Location: 1931602-1932882
NCBI BlastP on this gene
wcaK
putative colanic acid biosynthesis glycosyltransferase
Accession: VDZ30736
Location: 1932879-1934099
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein
Accession: VDZ30737
Location: 1934110-1935504
NCBI BlastP on this gene
wcaM
UTP--glucose-1-phosphate uridylyltransferase subunit GalF
Accession: VDZ30738
Location: 1935679-1936572
NCBI BlastP on this gene
galF
dTDP-D-glucose 4,6-dehydratase rmlB
Accession: VDZ30739
Location: 1936945-1938030

BlastP hit with rmlB
Percentage identity: 98 %
BlastP bit score: 613
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlB
dTDP-4-dehydrorhamnose reductase
Accession: VDZ30740
Location: 1938030-1938929

BlastP hit with rmlD
Percentage identity: 98 %
BlastP bit score: 608
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlD
glucose-1-phosphate thymidylyltransferase
Accession: VDZ30741
Location: 1938987-1939865

BlastP hit with rmlA
Percentage identity: 97 %
BlastP bit score: 592
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rfbA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession: VDZ30742
Location: 1939870-1940418

BlastP hit with rmlC
Percentage identity: 66 %
BlastP bit score: 237
Sequence coverage: 100 %
E-value: 4e-76

NCBI BlastP on this gene
rfbC
Uncharacterised protein
Accession: VDZ30743
Location: 1940425-1941498
NCBI BlastP on this gene
NCTC10444_01851
O-acetyltransferase
Accession: VDZ30744
Location: 1941491-1942222
NCBI BlastP on this gene
wbiO
O-antigen flippase
Accession: VDZ30745
Location: 1942215-1943702
NCBI BlastP on this gene
wzx
IS1 InsA protein
Accession: VDZ30746
Location: 1943762-1944034
NCBI BlastP on this gene
insA_3
IS1, transposase orfB
Accession: VDZ30747
Location: 1944061-1944456
NCBI BlastP on this gene
NCTC10444_01855
Uncharacterised protein
Accession: VDZ30748
Location: 1944510-1945577
NCBI BlastP on this gene
NCTC10444_01856
glycosyl transferase in colanic acid biosynthesis
Accession: VDZ30749
Location: 1945574-1946500
NCBI BlastP on this gene
kfoC
galactoside O-acetyltransferase
Accession: VDZ30750
Location: 1946487-1947047
NCBI BlastP on this gene
lacA_1
Query: Escherichia coli strain O146 O antigen gene cluster, complete
GU068041 : Escherichia coli strain W27 serogroup O115 O antigen gene cluster    Total score: 5.5     Cumulative Blast bit score: 2050
Hit cluster cross-links:   
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
RmlB
Accession: ADN43831
Location: 108-1193

BlastP hit with rmlB
Percentage identity: 98 %
BlastP bit score: 613
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlB
RmlD
Accession: ADN43832
Location: 1193-2092

BlastP hit with rmlD
Percentage identity: 98 %
BlastP bit score: 608
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlD
RmlA
Accession: ADN43833
Location: 2150-3028

BlastP hit with rmlA
Percentage identity: 97 %
BlastP bit score: 592
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlA
RmlC
Accession: ADN43834
Location: 3033-3581

BlastP hit with rmlC
Percentage identity: 66 %
BlastP bit score: 237
Sequence coverage: 100 %
E-value: 4e-76

NCBI BlastP on this gene
rmlC
WegG
Accession: ADN43835
Location: 3588-4661
NCBI BlastP on this gene
wegG
WegH
Accession: ADN43836
Location: 4654-5385
NCBI BlastP on this gene
wegH
Wzx
Accession: ADN43837
Location: 5378-6865
NCBI BlastP on this gene
wzx
Wzy
Accession: ADN43838
Location: 7673-8740
NCBI BlastP on this gene
wzy
WegI
Accession: ADN43839
Location: 8737-9663
NCBI BlastP on this gene
wegI
WegJ
Accession: ADN43840
Location: 9650-10210
NCBI BlastP on this gene
wegJ
Query: Escherichia coli strain O146 O antigen gene cluster, complete
EU289392 : Escherichia coli serogroup O53 O-antigen gene cluster    Total score: 5.5     Cumulative Blast bit score: 2050
Hit cluster cross-links:   
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
RmlB
Accession: ABZ79713
Location: 108-1193

BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 612
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlB
RmlD
Accession: ABZ79714
Location: 1193-2092

BlastP hit with rmlD
Percentage identity: 97 %
BlastP bit score: 605
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlD
RmlA
Accession: ABZ79715
Location: 2150-3028

BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 595
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlA
RmlC
Accession: ABZ79716
Location: 3033-3602

BlastP hit with rmlC
Percentage identity: 66 %
BlastP bit score: 238
Sequence coverage: 96 %
E-value: 3e-76

NCBI BlastP on this gene
rmlC
WbdE
Accession: ABZ79717
Location: 3589-4431
NCBI BlastP on this gene
wbdE
WbdF
Accession: ABZ79718
Location: 4428-5540
NCBI BlastP on this gene
wbdF
Wzx
Accession: ABZ79719
Location: 5521-6750
NCBI BlastP on this gene
wzx
WbdG
Accession: ABZ79720
Location: 6751-7845
NCBI BlastP on this gene
wbdG
Wzy
Accession: ABZ79721
Location: 7849-9141
NCBI BlastP on this gene
wzy
WbdS
Accession: ABZ79722
Location: 9134-10189
NCBI BlastP on this gene
wbdS
Query: Escherichia coli strain O146 O antigen gene cluster, complete
CP041520 : Escherichia coli strain 3057 chromosome.    Total score: 5.5     Cumulative Blast bit score: 2050
Hit cluster cross-links:   
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
M-antigen undecaprenyl disphosphate flippase
Accession: QDN48013
Location: 4401641-4403119
NCBI BlastP on this gene
wzxC
colanic acid biosynthesis pyruvyl transferase WcaK
Accession: QDN48012
Location: 4399989-4401269
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession: QDN48011
Location: 4398772-4399992
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession: QDN48010
Location: 4397367-4398761
NCBI BlastP on this gene
wcaM
UTP--glucose-1-phosphate uridylyltransferase GalF
Accession: QDN48009
Location: 4396299-4397192
NCBI BlastP on this gene
galF
dTDP-glucose 4,6-dehydratase
Accession: QDN48008
Location: 4394841-4395926

BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 612
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession: QDN48007
Location: 4393942-4394841

BlastP hit with rmlD
Percentage identity: 97 %
BlastP bit score: 605
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rfbD
glucose-1-phosphate thymidylyltransferase RfbA
Accession: QDN48006
Location: 4393006-4393884

BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 595
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rfbA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession: QDN48005
Location: 4392432-4393001

BlastP hit with rmlC
Percentage identity: 66 %
BlastP bit score: 238
Sequence coverage: 96 %
E-value: 3e-76

NCBI BlastP on this gene
rfbC
hypothetical protein
Accession: QDN48004
Location: 4391603-4392445
NCBI BlastP on this gene
FNJ66_21090
glycosyltransferase family 1 protein
Accession: QDN48003
Location: 4390494-4391606
NCBI BlastP on this gene
FNJ66_21085
O53 family O-antigen flippase
Accession: QDN48002
Location: 4389284-4390513
NCBI BlastP on this gene
wzx
glycosyltransferase family 4 protein
Accession: QDN48001
Location: 4388189-4389283
NCBI BlastP on this gene
FNJ66_21075
O53 family O-antigen polymerase
Accession: QDN48000
Location: 4386893-4388185
NCBI BlastP on this gene
wzy
glycosyltransferase family 1 protein
Accession: QDN47999
Location: 4385845-4386900
NCBI BlastP on this gene
FNJ66_21065
Query: Escherichia coli strain O146 O antigen gene cluster, complete
1. : DQ465249 Escherichia coli strain O146 O antigen gene cluster     Total score: 16.0     Cumulative Blast bit score: 7076
dTDP-glucose 4,6-dehydratase
Location: 301-1194
rmlB
dTDP-4-dyhydrorhamnose reductase
Location: 1194-2093
rmlD
glucose-1-phosphate thymidylyltransferase
Location: 2151-3029
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Location: 3034-3567
rmlC
nitroreductase
Location: 3582-4574
wbuD
flippase
Location: 4571-6109
wzx
unknown
Location: 6102-7205
wbuE
GT4
Location: 7552-8352
wbwU
gnl|TC-DB|R6L3Z4|2.A.121.4.7
Location: 8472-9650
wzy
glycosyltransferase
Location: 9613-10500
wbwV
GT2|GT2 Glycos transf 2
Location: 10550-11362
wbwW
dTDP-glucose 4,6-dehydratase
Accession: ABE98429
Location: 301-1194

BlastP hit with rmlB
Percentage identity: 100 %
BlastP bit score: 619
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlB
dTDP-4-dyhydrorhamnose reductase
Accession: ABE98430
Location: 1194-2093

BlastP hit with rmlD
Percentage identity: 100 %
BlastP bit score: 616
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlD
glucose-1-phosphate thymidylyltransferase
Accession: ABE98431
Location: 2151-3029

BlastP hit with rmlA
Percentage identity: 100 %
BlastP bit score: 602
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Accession: ABE98432
Location: 3034-3567

BlastP hit with rmlC
Percentage identity: 100 %
BlastP bit score: 365
Sequence coverage: 100 %
E-value: 9e-127

NCBI BlastP on this gene
rmlC
nitroreductase
Accession: ABE98433
Location: 3582-4574

BlastP hit with wbuD
Percentage identity: 100 %
BlastP bit score: 671
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
wbuD
flippase
Accession: ABE98434
Location: 4571-6109

BlastP hit with wzx
Percentage identity: 100 %
BlastP bit score: 1004
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
wzx
unknown
Accession: ABE98435
Location: 6102-7205

BlastP hit with wbuE
Percentage identity: 100 %
BlastP bit score: 757
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
wbuE
glycosyltransferase
Accession: ABE98436
Location: 7552-8352

BlastP hit with wbwU
Percentage identity: 100 %
BlastP bit score: 536
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
wbwU
polymerase
Accession: ABE98437
Location: 8472-9650

BlastP hit with wzy
Percentage identity: 100 %
BlastP bit score: 758
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
wzy
glycosyltransferase
Accession: ABE98438
Location: 9613-10500

BlastP hit with wbwV
Percentage identity: 100 %
BlastP bit score: 591
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
wbwV
glycosyltransferase
Accession: ABE98439
Location: 10550-11362

BlastP hit with wbwW
Percentage identity: 100 %
BlastP bit score: 557
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
wbwW
2. : CP022959 Escherichia coli ATCC 8739 chromosome     Total score: 15.5     Cumulative Blast bit score: 6858
colanic acid biosynthesis protein WcaM
Accession: AYB97325
Location: 1777530-1778924
NCBI BlastP on this gene
CJZ69_08895
N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans, octacis-undecaprenol 4-epimerase
Accession: AYB97326
Location: 1779082-1780077
NCBI BlastP on this gene
CJZ69_08900
UTP--glucose-1-phosphate uridylyltransferase
Accession: AYB97327
Location: 1780320-1781213
NCBI BlastP on this gene
galF
hypothetical protein
Accession: AYB97328
Location: 1781250-1781513
NCBI BlastP on this gene
CJZ69_08910
dTDP-glucose 4,6-dehydratase
Accession: AYB97329
Location: 1781585-1782670

BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 611
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession: AYB97330
Location: 1782670-1783569

BlastP hit with rmlD
Percentage identity: 95 %
BlastP bit score: 600
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
CJZ69_08920
glucose-1-phosphate thymidylyltransferase RfbA
Accession: AYB97331
Location: 1783627-1784505

BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 596
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rfbA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession: AYB97332
Location: 1784510-1785043

BlastP hit with rmlC
Percentage identity: 98 %
BlastP bit score: 361
Sequence coverage: 100 %
E-value: 8e-125

NCBI BlastP on this gene
rfbC
hypothetical protein
Accession: AYB97333
Location: 1785058-1786050

BlastP hit with wbuD
Percentage identity: 100 %
BlastP bit score: 671
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
CJZ69_08935
hypothetical protein
Accession: AYC00079
Location: 1786059-1787585

BlastP hit with wzx
Percentage identity: 99 %
BlastP bit score: 986
Sequence coverage: 99 %
E-value: 0.0

NCBI BlastP on this gene
CJZ69_08940
polysaccharide pyruvyl transferase family protein
Accession: AYB97334
Location: 1787578-1788681

BlastP hit with wbuE
Percentage identity: 99 %
BlastP bit score: 753
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
CJZ69_08945
glycosyl hydrolase family 1
Accession: AYB97335
Location: 1788687-1789829

BlastP hit with wbwU
Percentage identity: 100 %
BlastP bit score: 538
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
CJZ69_08950
hypothetical protein
Accession: AYB97336
Location: 1789891-1791126

BlastP hit with wzy
Percentage identity: 99 %
BlastP bit score: 756
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
CJZ69_08955
glycosyltransferase family 2 protein
Accession: AYB97337
Location: 1791089-1791976

BlastP hit with wbwV
Percentage identity: 98 %
BlastP bit score: 583
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
CJZ69_08960
amylovoran biosynthesis protein AmsE
Accession: CJZ69_08965
Location: 1792026-1792262
NCBI BlastP on this gene
CJZ69_08965
IS1 family transposase
Accession: CJZ69_08970
Location: 1792276-1792973
NCBI BlastP on this gene
CJZ69_08970
glycosyl transferase
Accession: CJZ69_08975
Location: 1792930-1793028
NCBI BlastP on this gene
CJZ69_08975
amylovoran biosynthesis protein AmsE
Accession: CJZ69_08980
Location: 1793030-1793614

BlastP hit with wbwW
Percentage identity: 100 %
BlastP bit score: 403
Sequence coverage: 71 %
E-value: 9e-140

NCBI BlastP on this gene
CJZ69_08980
phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating)
Accession: AYB97338
Location: 1794101-1795507
NCBI BlastP on this gene
CJZ69_08985
UDP-glucose 6-dehydrogenase
Accession: AYB97339
Location: 1795756-1796922
NCBI BlastP on this gene
CJZ69_08990
3. : CP000946 Escherichia coli ATCC 8739     Total score: 14.5     Cumulative Blast bit score: 6463
conserved hypothetical protein
Accession: ACA77257
Location: 1777533-1778927
NCBI BlastP on this gene
EcolC_1598
NAD-dependent epimerase/dehydratase
Accession: ACA77258
Location: 1779085-1780080
NCBI BlastP on this gene
EcolC_1599
regulatory protein GalF
Accession: ACA77259
Location: 1780323-1781216
NCBI BlastP on this gene
EcolC_1600
dTDP-glucose 4,6-dehydratase
Accession: ACA77260
Location: 1781588-1782673

BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 611
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
EcolC_1601
dTDP-4-dehydrorhamnose reductase
Accession: ACA77261
Location: 1782673-1783572

BlastP hit with rmlD
Percentage identity: 95 %
BlastP bit score: 600
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
EcolC_1602
glucose-1-phosphate thymidylyltransferase
Accession: ACA77262
Location: 1783630-1784508

BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 596
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
EcolC_1603
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession: ACA77263
Location: 1784513-1785046

BlastP hit with rmlC
Percentage identity: 98 %
BlastP bit score: 361
Sequence coverage: 100 %
E-value: 8e-125

NCBI BlastP on this gene
EcolC_1604
nitroreductase
Accession: ACA77264
Location: 1785061-1786053

BlastP hit with wbuD
Percentage identity: 100 %
BlastP bit score: 671
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
EcolC_1605
putative transmembrane protein
Accession: ACA77265
Location: 1786050-1787588

BlastP hit with wzx
Percentage identity: 99 %
BlastP bit score: 994
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
EcolC_1606
conserved hypothetical protein
Accession: ACA77266
Location: 1787581-1788684

BlastP hit with wbuE
Percentage identity: 99 %
BlastP bit score: 753
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
EcolC_1607
glycosyl transferase group 1
Accession: ACA77267
Location: 1788690-1789832

BlastP hit with wbwU
Percentage identity: 100 %
BlastP bit score: 538
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
EcolC_1608
hypothetical protein
Accession: ACA77268
Location: 1789894-1791129

BlastP hit with wzy
Percentage identity: 99 %
BlastP bit score: 756
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
EcolC_1609
glycosyl transferase family 2
Accession: ACA77269
Location: 1791092-1791979

BlastP hit with wbwV
Percentage identity: 98 %
BlastP bit score: 583
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
EcolC_1610
Insertion element protein
Accession: ACA77270
Location: 1792279-1792976
NCBI BlastP on this gene
EcolC_1612
6-phosphogluconate dehydrogenase, decarboxylating
Accession: ACA77271
Location: 1794104-1795510
NCBI BlastP on this gene
EcolC_1613
4. : CP025753 Escherichia coli strain CV839-06 chromosome     Total score: 8.0     Cumulative Blast bit score: 2418
colanic acid biosynthesis protein
Accession: AUP46365
Location: 3846911-3848191
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession: AUP46366
Location: 3848188-3849408
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein
Accession: AUP46367
Location: 3849419-3850813
NCBI BlastP on this gene
wcaM
UDP-N-acetylglucosamine 4-epimerase
Accession: AUP46368
Location: 3850971-3851966
NCBI BlastP on this gene
CV83906_3804
UTP--glucose-1-phosphate uridylyltransferase subunit GalU UTP--glucose-1-phosphate uridylyltransferase
Accession: AUP46369
Location: 3852209-3853102
NCBI BlastP on this gene
CV83906_3805
dTDP-glucose 4,6-dehydratase
Accession: AUP46370
Location: 3853475-3854560

BlastP hit with rmlB
Percentage identity: 98 %
BlastP bit score: 612
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
CV83906_3806
dTDP-4-dehydrorhamnose reductase
Accession: AUP46371
Location: 3854560-3855462

BlastP hit with rmlD
Percentage identity: 94 %
BlastP bit score: 591
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rfbD
glucose-1-phosphate thymidylyltransferase
Accession: AUP46372
Location: 3855517-3856395

BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 595
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
CV83906_3808
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession: AUP46373
Location: 3856400-3856957

BlastP hit with rmlC
Percentage identity: 63 %
BlastP bit score: 238
Sequence coverage: 100 %
E-value: 2e-76

NCBI BlastP on this gene
rfbC
transporter
Accession: AUP46374
Location: 3856954-3858186
NCBI BlastP on this gene
CV83906_3810
polymerase
Accession: AUP46375
Location: 3858242-3859429

BlastP hit with wzy
Percentage identity: 42 %
BlastP bit score: 225
Sequence coverage: 95 %
E-value: 2e-65

NCBI BlastP on this gene
CV83906_3811
dTDP-rhamnosyl transferase
Accession: AUP46376
Location: 3859446-3860315

BlastP hit with wbwV
Percentage identity: 32 %
BlastP bit score: 157
Sequence coverage: 96 %
E-value: 5e-42

NCBI BlastP on this gene
CV83906_3812
N-acetylgalactosaminyl-diphosphoundecaprenol glucuronosyltransferase
Accession: AUP46377
Location: 3860312-3861145
NCBI BlastP on this gene
CV83906_3813
6-phosphogluconate dehydrogenase
Accession: AUP46378
Location: 3861250-3862656
NCBI BlastP on this gene
CV83906_3814
UDP-glucose 6-dehydrogenase
Accession: AUP46379
Location: 3862905-3864071
NCBI BlastP on this gene
CV83906_3815
hypothetical protein
Accession: AUP46380
Location: 3864137-3865141
NCBI BlastP on this gene
CV83906_3816
chain-length determining protein
Accession: AUP46381
Location: 3865550-3866527
NCBI BlastP on this gene
wzzB
5. : DQ868766 Escherichia coli serogroup O147 O-antigen gene cluster     Total score: 8.0     Cumulative Blast bit score: 2417
RmlB
Accession: ABI98981
Location: 1138-2223

BlastP hit with rmlB
Percentage identity: 98 %
BlastP bit score: 612
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlB
RmlD
Accession: ABI98982
Location: 2223-3125

BlastP hit with rmlD
Percentage identity: 94 %
BlastP bit score: 591
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlD
RmlA
Accession: ABI98983
Location: 3180-4058

BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 595
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlA
RmlC
Accession: ABI98984
Location: 4063-4620

BlastP hit with rmlC
Percentage identity: 63 %
BlastP bit score: 238
Sequence coverage: 100 %
E-value: 2e-76

NCBI BlastP on this gene
rmlC
Wzx
Accession: ABI98985
Location: 4617-5849
NCBI BlastP on this gene
wzx
Wzy
Accession: ABI98986
Location: 5905-7092

BlastP hit with wzy
Percentage identity: 42 %
BlastP bit score: 225
Sequence coverage: 95 %
E-value: 2e-65

NCBI BlastP on this gene
wzy
WfbY
Accession: ABI98987
Location: 7109-7978

BlastP hit with wbwV
Percentage identity: 32 %
BlastP bit score: 156
Sequence coverage: 96 %
E-value: 1e-41

NCBI BlastP on this gene
wfbY
WfbZ
Accession: ABI98988
Location: 7975-8808
NCBI BlastP on this gene
wfbZ
6. : EU294165 Shigella flexneri 6 O antigen gene cluster     Total score: 8.0     Cumulative Blast bit score: 2410
RmlB
Accession: ACA24767
Location: 107-1192

BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 608
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlB
RmlD
Accession: ACA24768
Location: 1192-2091

BlastP hit with rmlD
Percentage identity: 94 %
BlastP bit score: 587
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlD
RmlA
Accession: ACA24769
Location: 2149-3027

BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 595
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlA
RmlC
Accession: ACA24770
Location: 3032-3589

BlastP hit with rmlC
Percentage identity: 63 %
BlastP bit score: 238
Sequence coverage: 100 %
E-value: 2e-76

NCBI BlastP on this gene
rmlC
Wzx
Accession: ACA24771
Location: 3586-4818
NCBI BlastP on this gene
wzx
Wzy
Accession: ACA24772
Location: 4874-6061

BlastP hit with wzy
Percentage identity: 42 %
BlastP bit score: 225
Sequence coverage: 95 %
E-value: 2e-65

NCBI BlastP on this gene
wzy
WfbY
Accession: ACA24773
Location: 6078-6947

BlastP hit with wbwV
Percentage identity: 32 %
BlastP bit score: 157
Sequence coverage: 96 %
E-value: 5e-42

NCBI BlastP on this gene
wfbY
WfbZ
Accession: ACA24774
Location: 6944-7777
NCBI BlastP on this gene
wfbZ
7. : EU118169 Shigella flexneri strain NCTC9779 O-antigen gene cluster     Total score: 8.0     Cumulative Blast bit score: 2410
GalF
Accession: ABU80595
Location: 1-657
NCBI BlastP on this gene
galF
dTDP-D-glucose 4,6-dehydratase
Accession: ABU80596
Location: 1030-2115

BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 608
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlB
dTDP-6-deoxy-L-mannose dehydrogenase
Accession: ABU80597
Location: 2115-3014

BlastP hit with rmlD
Percentage identity: 94 %
BlastP bit score: 587
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlD
glucose-1-phosphate thymidylyltransferase
Accession: ABU80598
Location: 3072-3950

BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 595
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Accession: ABU80599
Location: 3955-4512

BlastP hit with rmlC
Percentage identity: 63 %
BlastP bit score: 238
Sequence coverage: 100 %
E-value: 2e-76

NCBI BlastP on this gene
rmlC
O-antigen flippase
Accession: ABU80600
Location: 4509-5741
NCBI BlastP on this gene
wzx
O-antigen polymerase
Accession: ABU80601
Location: 5797-6984

BlastP hit with wzy
Percentage identity: 42 %
BlastP bit score: 225
Sequence coverage: 95 %
E-value: 2e-65

NCBI BlastP on this gene
wzy
glycosyltransferase
Accession: ABU80602
Location: 7001-7870

BlastP hit with wbwV
Percentage identity: 32 %
BlastP bit score: 157
Sequence coverage: 96 %
E-value: 5e-42

NCBI BlastP on this gene
wfbY
glycosyltransferase
Accession: ABU80603
Location: 7867-8700
NCBI BlastP on this gene
wfbZ
Gnd
Accession: ABU80604
Location: 8805-8900
NCBI BlastP on this gene
gnd
8. : EU118168 Shigella flexneri strain IB1833 O-antigen gene cluster     Total score: 8.0     Cumulative Blast bit score: 2410
GalF
Accession: ABU80585
Location: 1-657
NCBI BlastP on this gene
galF
dTDP-D-glucose 4,6-dehydratase
Accession: ABU80586
Location: 1030-2115

BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 608
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlB
dTDP-6-deoxy-L-mannose dehydrogenase
Accession: ABU80587
Location: 2115-3014

BlastP hit with rmlD
Percentage identity: 94 %
BlastP bit score: 587
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlD
glucose-1-phosphate thymidylyltransferase
Accession: ABU80588
Location: 3072-3950

BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 595
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Accession: ABU80589
Location: 3955-4512

BlastP hit with rmlC
Percentage identity: 63 %
BlastP bit score: 238
Sequence coverage: 100 %
E-value: 2e-76

NCBI BlastP on this gene
rmlC
O-antigen flippase
Accession: ABU80590
Location: 4509-5741
NCBI BlastP on this gene
wzx
O-antigen polymerase
Accession: ABU80591
Location: 5797-6984

BlastP hit with wzy
Percentage identity: 42 %
BlastP bit score: 225
Sequence coverage: 95 %
E-value: 2e-65

NCBI BlastP on this gene
wzy
glycosyltransferase
Accession: ABU80592
Location: 7001-7870

BlastP hit with wbwV
Percentage identity: 32 %
BlastP bit score: 157
Sequence coverage: 96 %
E-value: 5e-42

NCBI BlastP on this gene
wfbY
glycosyltransferase
Accession: ABU80593
Location: 7867-8700
NCBI BlastP on this gene
wfbZ
Gnd
Accession: ABU80594
Location: 8805-8900
NCBI BlastP on this gene
gnd
9. : EU294168 Escherichia coli serotype O150 O antigen gene cluster     Total score: 8.0     Cumulative Blast bit score: 2259
RmlB
Accession: ACA24793
Location: 1138-2223

BlastP hit with rmlB
Percentage identity: 98 %
BlastP bit score: 616
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlB
RmlD
Accession: ACA24794
Location: 2223-3122

BlastP hit with rmlD
Percentage identity: 95 %
BlastP bit score: 594
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlD
RmlA
Accession: ACA24795
Location: 3180-4058

BlastP hit with rmlA
Percentage identity: 99 %
BlastP bit score: 598
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlA
RmlC
Accession: ACA24796
Location: 4063-4614

BlastP hit with rmlC
Percentage identity: 66 %
BlastP bit score: 235
Sequence coverage: 96 %
E-value: 3e-75

NCBI BlastP on this gene
rmlC
WfgF
Accession: ACA24797
Location: 4616-5599

BlastP hit with wbuD
Percentage identity: 33 %
BlastP bit score: 94
Sequence coverage: 60 %
E-value: 7e-19

NCBI BlastP on this gene
wfgF
Wzx
Accession: ACA24798
Location: 5632-7134
NCBI BlastP on this gene
wzx
WfgG
Accession: ACA24799
Location: 7137-8282
NCBI BlastP on this gene
wfgG
WfgH
Accession: ACA24800
Location: 8307-9197
NCBI BlastP on this gene
wfgH
WfgI
Accession: ACA24801
Location: 9184-10098

BlastP hit with wbwV
Percentage identity: 31 %
BlastP bit score: 122
Sequence coverage: 100 %
E-value: 8e-29

NCBI BlastP on this gene
wfgI
WfgK
Accession: ACA24802
Location: 10098-10994
NCBI BlastP on this gene
wfgK
Wzy
Accession: ACA24803
Location: 11012-12109
NCBI BlastP on this gene
wzy
10. : KY710702 Proteus vulgaris strain PrK 48/57 O antigen gene cluster     Total score: 7.5     Cumulative Blast bit score: 1416
rmlD
Accession: AXY99577
Location: 1039-1920
NCBI BlastP on this gene
AXY99577
rmlA
Accession: AXY99578
Location: 1946-2824
NCBI BlastP on this gene
AXY99578
rmlC
Accession: AXY99579
Location: 2827-3372

BlastP hit with rmlC
Percentage identity: 67 %
BlastP bit score: 241
Sequence coverage: 99 %
E-value: 2e-77

NCBI BlastP on this gene
AXY99579
hypothetical protein
Accession: AXY99580
Location: 3374-4462
NCBI BlastP on this gene
AXY99580
wzx
Accession: AXY99581
Location: 4449-5960

BlastP hit with wzx
Percentage identity: 38 %
BlastP bit score: 297
Sequence coverage: 85 %
E-value: 2e-90

NCBI BlastP on this gene
AXY99581
Polysaccharide pyruvyl transferase
Accession: AXY99582
Location: 5957-7060

BlastP hit with wbuE
Percentage identity: 46 %
BlastP bit score: 322
Sequence coverage: 98 %
E-value: 2e-103

NCBI BlastP on this gene
AXY99582
gt1
Accession: AXY99583
Location: 7066-8220

BlastP hit with wbwU
Percentage identity: 41 %
BlastP bit score: 205
Sequence coverage: 102 %
E-value: 1e-59

NCBI BlastP on this gene
AXY99583
gt2
Accession: AXY99584
Location: 8230-9081

BlastP hit with wbwV
Percentage identity: 45 %
BlastP bit score: 196
Sequence coverage: 89 %
E-value: 4e-57

NCBI BlastP on this gene
AXY99584
wzy
Accession: AXY99585
Location: 9071-10249

BlastP hit with wzy
Percentage identity: 35 %
BlastP bit score: 155
Sequence coverage: 82 %
E-value: 2e-39

NCBI BlastP on this gene
AXY99585
hypothetical protein
Accession: AXY99586
Location: 10411-10935
NCBI BlastP on this gene
AXY99586
hypothetical protein
Accession: AXY99587
Location: 10938-11663
NCBI BlastP on this gene
AXY99587
gt3
Accession: AXY99588
Location: 11863-12528
NCBI BlastP on this gene
AXY99588
ugd
Accession: AXY99589
Location: 12933-14099
NCBI BlastP on this gene
AXY99589
wenM
Accession: AXY99590
Location: 14111-14614
NCBI BlastP on this gene
AXY99590
wenN
Accession: AXY99591
Location: 14690-15247
NCBI BlastP on this gene
AXY99591
cysE
Accession: AXY99592
Location: 15247-16080
NCBI BlastP on this gene
AXY99592
11. : CP014197 Escherichia coli strain MRE600     Total score: 7.0     Cumulative Blast bit score: 2147
colanic acid transporter
Accession: AMB53781
Location: 1640350-1641828
NCBI BlastP on this gene
AWB62_08105
colanic acid biosynthesis pyruvyl transferase WcaK
Accession: AMB53782
Location: 1642104-1643384
NCBI BlastP on this gene
AWB62_08110
colanic acid biosynthesis glycosyltransferase WcaL
Accession: AWB62_08115
Location: 1643381-1644600
NCBI BlastP on this gene
AWB62_08115
colanic acid biosynthesis protein WcaM
Accession: AMB53783
Location: 1644611-1646005
NCBI BlastP on this gene
wcaM
UTP--glucose-1-phosphate uridylyltransferase
Accession: AMB53784
Location: 1646180-1647073
NCBI BlastP on this gene
AWB62_08125
dTDP-glucose 4,6-dehydratase
Accession: AMB53785
Location: 1647445-1648530

BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 611
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
AWB62_08130
dTDP-4-dehydrorhamnose reductase
Accession: AMB53786
Location: 1648530-1649429

BlastP hit with rmlD
Percentage identity: 97 %
BlastP bit score: 605
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
AWB62_08135
glucose-1-phosphate thymidylyltransferase
Accession: AMB53787
Location: 1649487-1650365

BlastP hit with rmlA
Percentage identity: 99 %
BlastP bit score: 598
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
AWB62_08140
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession: AMB53788
Location: 1650370-1650921

BlastP hit with rmlC
Percentage identity: 66 %
BlastP bit score: 239
Sequence coverage: 96 %
E-value: 1e-76

NCBI BlastP on this gene
AWB62_08145
hypothetical protein
Accession: AMB53789
Location: 1650923-1651906

BlastP hit with wbuD
Percentage identity: 32 %
BlastP bit score: 94
Sequence coverage: 60 %
E-value: 1e-18

NCBI BlastP on this gene
AWB62_08150
hypothetical protein
Accession: AMB53790
Location: 1651939-1653441
NCBI BlastP on this gene
AWB62_08155
hypothetical protein
Accession: AMB53791
Location: 1653444-1654589
NCBI BlastP on this gene
AWB62_08160
hypothetical protein
Accession: AMB53792
Location: 1654596-1655504
NCBI BlastP on this gene
AWB62_08165
hypothetical protein
Accession: AMB53793
Location: 1655491-1656405
NCBI BlastP on this gene
AWB62_08170
glycosyl transferase
Accession: AMB56687
Location: 1656417-1657301
NCBI BlastP on this gene
AWB62_08175
hypothetical protein
Accession: AMB53794
Location: 1657319-1658416
NCBI BlastP on this gene
AWB62_08180
12. : EU294167 Shigella dysenteriae O antigen gene cluster     Total score: 7.0     Cumulative Blast bit score: 2146
RmlB
Accession: ACA24782
Location: 1137-2222

BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 611
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlB
RmlD
Accession: ACA24783
Location: 2222-3121

BlastP hit with rmlD
Percentage identity: 97 %
BlastP bit score: 604
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlD
RmlA
Accession: ACA24784
Location: 3179-4057

BlastP hit with rmlA
Percentage identity: 99 %
BlastP bit score: 598
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlA
RmlC
Accession: ACA24785
Location: 4062-4613

BlastP hit with rmlC
Percentage identity: 66 %
BlastP bit score: 239
Sequence coverage: 96 %
E-value: 1e-76

NCBI BlastP on this gene
rmlC
WfgF
Accession: ACA24786
Location: 4615-5598

BlastP hit with wbuD
Percentage identity: 32 %
BlastP bit score: 94
Sequence coverage: 60 %
E-value: 1e-18

NCBI BlastP on this gene
wfgF
Wzx
Accession: ACA24787
Location: 5631-7133
NCBI BlastP on this gene
wzx
WfgG
Accession: ACA24788
Location: 7136-8281
NCBI BlastP on this gene
wfgG
WfgH
Accession: ACA24789
Location: 8306-9196
NCBI BlastP on this gene
wfgH
WfgI
Accession: ACA24790
Location: 9183-10097
NCBI BlastP on this gene
wfgI
WfgK
Accession: ACA24791
Location: 10097-10993
NCBI BlastP on this gene
wfgK
Wzy
Accession: ACA24792
Location: 11011-12108
NCBI BlastP on this gene
wzy
13. : LC494338 Escherichia albertii V3-1al genes for O-antigen region     Total score: 6.5     Cumulative Blast bit score: 2576
predicted UTP-glucose-1-phosphate uridylyltransferase
Accession: BBM62815
Location: 1872-2765
NCBI BlastP on this gene
galF
predicted dTDP-glucose 4,6-dehydratase
Accession: BBM62816
Location: 3137-4222
NCBI BlastP on this gene
rmlB
predicted dTDP-4-dehydrorhamnose reductase
Accession: BBM62817
Location: 4222-5121
NCBI BlastP on this gene
rmlD
predicted glucose-1-phosphate thymidylyltransferase
Accession: BBM62818
Location: 5179-6057

BlastP hit with rmlA
Percentage identity: 97 %
BlastP bit score: 593
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rfbA
predicted dTDP-4-dehydrorhamnose 3,5-epimerase
Accession: BBM62819
Location: 6062-6595

BlastP hit with rmlC
Percentage identity: 68 %
BlastP bit score: 239
Sequence coverage: 96 %
E-value: 5e-77

NCBI BlastP on this gene
rmlC
predicted O-antigen flippase
Accession: BBM62820
Location: 6629-7870
NCBI BlastP on this gene
wzx
predicted glycerophosphotransferase family protein
Accession: BBM62821
Location: 7867-9069
NCBI BlastP on this gene
BBM62821
predicted glycosyltransferase, GTA type superfamily
Accession: BBM62822
Location: 10497-11987
NCBI BlastP on this gene
BBM62822
O-antigen polymerase
Accession: BBM62823
Location: 14896-16131

BlastP hit with wzy
Percentage identity: 92 %
BlastP bit score: 646
Sequence coverage: 99 %
E-value: 0.0

NCBI BlastP on this gene
wzy
glycosyl transferase family 2
Accession: BBM62824
Location: 16094-16981

BlastP hit with wbwV
Percentage identity: 96 %
BlastP bit score: 570
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
BBM62824
glycosyl transferase family 2
Accession: BBM62825
Location: 17031-17843

BlastP hit with wbwW
Percentage identity: 94 %
BlastP bit score: 528
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
BBM62825
NADP-dependent phosphogluconate dehydrogenase
Accession: BBM62826
Location: 18314-19720
NCBI BlastP on this gene
gnd
UDP-glucose 6-dehydrogenase
Accession: BBM62827
Location: 19962-21128
NCBI BlastP on this gene
ugd
14. : KP835691 Escherichia coli strain 8547 serotype OX43:H28 O-antigen gene cluster     Total score: 6.5     Cumulative Blast bit score: 2308
dTDP-glucose 4,6-dehydratase
Accession: AKM71180
Location: 108-1193

BlastP hit with rmlB
Percentage identity: 96 %
BlastP bit score: 602
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlB
dTDP-4-dehydrorhamnose reductase
Accession: AKM71181
Location: 1193-2092

BlastP hit with rmlD
Percentage identity: 94 %
BlastP bit score: 590
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlD
glucose-1-phosphate thymidylyltransferase 1
Accession: AKM71182
Location: 2150-3028

BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 595
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession: AKM71183
Location: 3033-3587

BlastP hit with rmlC
Percentage identity: 67 %
BlastP bit score: 241
Sequence coverage: 96 %
E-value: 1e-77

NCBI BlastP on this gene
rmlC
O-antigene flippase
Accession: AKM71184
Location: 3584-4840
NCBI BlastP on this gene
wzx
O-antigene polymerase
Accession: AKM71185
Location: 4842-5966
NCBI BlastP on this gene
AKM71185
glycosyltransferase family 2
Accession: AKM71186
Location: 5954-6856

BlastP hit with wbwV
Percentage identity: 33 %
BlastP bit score: 147
Sequence coverage: 100 %
E-value: 4e-38

NCBI BlastP on this gene
AKM71186
rhamnosyltransferase
Accession: AKM71187
Location: 6904-7785

BlastP hit with wbwV
Percentage identity: 34 %
BlastP bit score: 133
Sequence coverage: 91 %
E-value: 6e-33

NCBI BlastP on this gene
AKM71187
H repeat-associated protein
Accession: AKM71188
Location: 8134-9270
NCBI BlastP on this gene
yhhI
rhamnosyl transferase I domain protein
Accession: AKM71189
Location: 9365-9493
NCBI BlastP on this gene
AKM71189
glycosyl hydrolase family 1
Accession: AKM71190
Location: 9503-10594
NCBI BlastP on this gene
wbbG
15. : AB811604 Escherichia coli DNA, O-antigen biosynthetic locus, strain: F8188-41.     Total score: 6.5     Cumulative Blast bit score: 2308
not annotated
Accession: BAQ00698
Location: 1-906
NCBI BlastP on this gene
wcaM
UTP-glucose-1-phosphate uridylyltransferase
Accession: BAQ00699
Location: 1069-1974
NCBI BlastP on this gene
galF
dTDP-glucose 4,6 dehydratase
Accession: BAQ00700
Location: 2345-3430

BlastP hit with rmlB
Percentage identity: 96 %
BlastP bit score: 602
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlB
dTDP-4-dehydrorhamnose reductase
Accession: BAQ00701
Location: 3430-4329

BlastP hit with rmlD
Percentage identity: 94 %
BlastP bit score: 590
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlD
glucose-1-phosphate thymidylyltransferase
Accession: BAQ00702
Location: 4387-5265

BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 595
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession: BAQ00703
Location: 5270-5824

BlastP hit with rmlC
Percentage identity: 67 %
BlastP bit score: 241
Sequence coverage: 96 %
E-value: 1e-77

NCBI BlastP on this gene
rmlC
O-antigen flippase
Accession: BAQ00704
Location: 5821-7077
NCBI BlastP on this gene
wzx
O-antigen polymerase
Accession: BAQ00705
Location: 7079-8203
NCBI BlastP on this gene
wzy
putative glycosyltransferase
Accession: BAQ00706
Location: 8191-9093

BlastP hit with wbwV
Percentage identity: 33 %
BlastP bit score: 147
Sequence coverage: 100 %
E-value: 4e-38

NCBI BlastP on this gene
BAQ00706
putative glycosyltransferase
Accession: BAQ00707
Location: 9141-10022

BlastP hit with wbwV
Percentage identity: 34 %
BlastP bit score: 133
Sequence coverage: 91 %
E-value: 7e-33

NCBI BlastP on this gene
BAQ00707
transposase of ISEc1
Accession: BAQ00708
Location: 10371-11507
NCBI BlastP on this gene
BAQ00708
putative glycosyltransferase
Accession: BAQ00709
Location: 11740-12831
NCBI BlastP on this gene
BAQ00709
6-phosphogluconate dehydrogenase
Accession: BAQ00710
Location: 12939-14345
NCBI BlastP on this gene
gnd
UDP-glucose 6-dehydrogenase
Accession: BAQ00711
Location: 14595-15761
NCBI BlastP on this gene
ugd
16. : AB812057 Escherichia coli genes for O-antigen biosynthetic locus     Total score: 6.5     Cumulative Blast bit score: 2220
colanic acid biosynthesis protein
Accession: BAQ01666
Location: 3-896
NCBI BlastP on this gene
wcaM
UTP-glucose-1-phosphate uridylyltransferase
Accession: BAQ01667
Location: 1071-1964
NCBI BlastP on this gene
galF
dTDP-glucose 4,6 dehydratase
Accession: BAQ01668
Location: 2335-3420

BlastP hit with rmlB
Percentage identity: 98 %
BlastP bit score: 612
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlB
dTDP-4-dehydrorhamnose reductase
Accession: BAQ01669
Location: 3420-4319

BlastP hit with rmlD
Percentage identity: 97 %
BlastP bit score: 608
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlD
glucose-1-phosphate thymidylyltransferase
Accession: BAQ01670
Location: 4377-5255

BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 595
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession: BAQ01671
Location: 5260-5796

BlastP hit with rmlC
Percentage identity: 67 %
BlastP bit score: 245
Sequence coverage: 99 %
E-value: 3e-79

NCBI BlastP on this gene
rmlC
O-antigen flippase
Accession: BAQ01672
Location: 5836-7077
NCBI BlastP on this gene
wzx
putative glycosyltransferase
Accession: BAQ01673
Location: 7062-7955

BlastP hit with wbwV
Percentage identity: 34 %
BlastP bit score: 160
Sequence coverage: 100 %
E-value: 7e-43

NCBI BlastP on this gene
BAQ01673
putative glycosyltransferase
Accession: BAQ01674
Location: 7961-9067
NCBI BlastP on this gene
BAQ01674
O-antigen polymerase
Accession: BAQ01675
Location: 9381-10538
NCBI BlastP on this gene
wzy
6-phosphogluconate dehydrogenase
Accession: BAQ01676
Location: 10714-12120
NCBI BlastP on this gene
gnd
UDP-glucose 6-dehydrogenase
Accession: BAQ01677
Location: 12369-13535
NCBI BlastP on this gene
ugd
putative nucleotide sugar epimerase
Accession: BAQ01678
Location: 13601-14605
NCBI BlastP on this gene
BAQ01678
17. : KJ710509 Escherichia coli strain N 282 serotype O133:K-:H29 O-antigen gene cluster     Total score: 6.5     Cumulative Blast bit score: 2218
dTDP-glucose 4,6-dehydratase
Accession: AIG62386
Location: 126-1211

BlastP hit with rmlB
Percentage identity: 98 %
BlastP bit score: 612
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlB
dTDP-4-dehydrorhamnose reductase
Accession: AIG62388
Location: 1211-2110

BlastP hit with rmlD
Percentage identity: 97 %
BlastP bit score: 607
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlD
glucose-1-phosphate thymidylyltransferase 1
Accession: AIG62389
Location: 2168-3046

BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 595
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession: AIG62390
Location: 3051-3587

BlastP hit with rmlC
Percentage identity: 67 %
BlastP bit score: 245
Sequence coverage: 99 %
E-value: 3e-79

NCBI BlastP on this gene
rmlC
O-antigen flippase
Accession: AIG62391
Location: 3627-4868
NCBI BlastP on this gene
wzx
glycosyl transferase family 2
Accession: AIG62392
Location: 4844-5746

BlastP hit with wbwV
Percentage identity: 34 %
BlastP bit score: 159
Sequence coverage: 100 %
E-value: 8e-43

NCBI BlastP on this gene
AIG62392
N,
Accession: AIG62393
Location: 5752-6858
NCBI BlastP on this gene
pglA
O-antigen polymerase
Accession: AIG62394
Location: 7172-8329
NCBI BlastP on this gene
wzy
18. : LC125930 Escherichia coli DNA, O-antigen biosynthesis gene cluster, strain: 90823.     Total score: 6.5     Cumulative Blast bit score: 2216
colanic acid biosynthesis protein
Accession: BAU71599
Location: 1-906
NCBI BlastP on this gene
wcaM
UTP-glucose-1-phosphate uridylyltransferase
Accession: BAU71600
Location: 1069-1974
NCBI BlastP on this gene
galF
dTDP-glucose 4,6 dehydratase
Accession: BAU71601
Location: 2347-3432

BlastP hit with rmlB
Percentage identity: 98 %
BlastP bit score: 612
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlB
dTDP-4-dehydrorhamnose reductase
Accession: BAU71602
Location: 3432-4331

BlastP hit with rmlD
Percentage identity: 96 %
BlastP bit score: 602
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlD
glucose-1-phosphate thymidylyltransferase
Accession: BAU71603
Location: 4389-5267

BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 596
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession: BAU71604
Location: 5272-5805

BlastP hit with rmlC
Percentage identity: 68 %
BlastP bit score: 242
Sequence coverage: 96 %
E-value: 4e-78

NCBI BlastP on this gene
rmlC
O-antigen flippase
Accession: BAU71605
Location: 5802-7079
NCBI BlastP on this gene
wzx
putative UDP-N-acetylglucosamine 2-epimerase
Accession: BAU71606
Location: 7091-8224
NCBI BlastP on this gene
BAU71606
putative glycosyltransferase
Accession: BAU71607
Location: 8292-9365
NCBI BlastP on this gene
BAU71607
O-antigen polymerase
Accession: BAU71608
Location: 9557-10576
NCBI BlastP on this gene
wzy
putative glycosyltranslocase
Accession: BAU71609
Location: 10551-11516

BlastP hit with wbwV
Percentage identity: 35 %
BlastP bit score: 164
Sequence coverage: 100 %
E-value: 2e-44

NCBI BlastP on this gene
BAU71609
putative glycosyltranslocase
Accession: BAU71610
Location: 11518-12663
NCBI BlastP on this gene
BAU71610
6-phosphogluconate dehydrogenase
Accession: BAU71611
Location: 12898-14304
NCBI BlastP on this gene
gnd
UDP-glucose 6-dehydrogenase
Accession: BAU71612
Location: 14550-15716
NCBI BlastP on this gene
ugd
19. : KY115224 Escherichia coli O1:H33 hypothetical protein gene     Total score: 6.5     Cumulative Blast bit score: 2216
dTDP-glucose-4,6-dehydratase
Accession: AQU71735
Location: 10794-11879

BlastP hit with rmlB
Percentage identity: 98 %
BlastP bit score: 612
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlB
dTDP-4-dehydrorhamnose reductase
Accession: AQU71734
Location: 9895-10794

BlastP hit with rmlD
Percentage identity: 96 %
BlastP bit score: 602
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlD
glucose-1-phosphate thymidylyltransferase
Accession: AQU71733
Location: 8959-9837

BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 596
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession: AQU71732
Location: 8421-8954

BlastP hit with rmlC
Percentage identity: 68 %
BlastP bit score: 242
Sequence coverage: 96 %
E-value: 4e-78

NCBI BlastP on this gene
rmlC
O-antigen transporter Wzx
Accession: AQU71731
Location: 7147-8424
NCBI BlastP on this gene
wzx
UDP-N-acetylglucosamine 2-epimerase
Accession: AQU71730
Location: 6002-7135
NCBI BlastP on this gene
mnaA
glycosyl transferase
Accession: AQU71729
Location: 4861-5934
NCBI BlastP on this gene
wekM
O-antigen polymerase
Accession: AQU71728
Location: 3650-4669
NCBI BlastP on this gene
wzy
glycosyl transferase family protein
Accession: AQU71727
Location: 2710-3675

BlastP hit with wbwV
Percentage identity: 35 %
BlastP bit score: 164
Sequence coverage: 100 %
E-value: 2e-44

NCBI BlastP on this gene
AQU71727
galactosyltransferase WbgM
Accession: AQU71726
Location: 1563-2708
NCBI BlastP on this gene
wbgM
hypothetical protein
Accession: AQU71725
Location: 144-980
NCBI BlastP on this gene
AQU71725
20. : KY115223 Escherichia coli O1:H12 O1-variant O-antigen gene cluster     Total score: 6.5     Cumulative Blast bit score: 2216
dTDP-glucose-4,6-dehydratase
Accession: AQU71724
Location: 9516-10601

BlastP hit with rmlB
Percentage identity: 98 %
BlastP bit score: 612
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlB
dTDP-4-dehydrorhamnose reductase
Accession: AQU71723
Location: 8617-9516

BlastP hit with rmlD
Percentage identity: 96 %
BlastP bit score: 602
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlD
glucose-1-phosphate thymidylyltransferase
Accession: AQU71722
Location: 7681-8559

BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 596
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession: AQU71721
Location: 7143-7676

BlastP hit with rmlC
Percentage identity: 68 %
BlastP bit score: 242
Sequence coverage: 96 %
E-value: 4e-78

NCBI BlastP on this gene
rmlC
O-antigen transporter
Accession: AQU71720
Location: 5869-7146
NCBI BlastP on this gene
wzx
UDP-N-acetylglucosamine 2-epimerase
Accession: AQU71719
Location: 4724-5857
NCBI BlastP on this gene
mnaA
hypothetical protein
Accession: AQU71718
Location: 3583-4656
NCBI BlastP on this gene
wekM
O-antigen polymerase
Accession: AQU71717
Location: 2372-3391
NCBI BlastP on this gene
wzy
glycosyl transferase family protein
Accession: AQU71716
Location: 1432-2397

BlastP hit with wbwV
Percentage identity: 35 %
BlastP bit score: 164
Sequence coverage: 100 %
E-value: 2e-44

NCBI BlastP on this gene
AQU71716
galactosyltransferase
Accession: AQU71715
Location: 285-1430
NCBI BlastP on this gene
wbgM
21. : CP028192 Escherichia coli strain CFSAN018748 chromosome     Total score: 6.5     Cumulative Blast bit score: 2214
colanic acid biosynthesis pyruvyl transferase WcaK
Accession: AVS47391
Location: 2351876-2353156
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession: AVS47392
Location: 2353153-2354373
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession: AVS47393
Location: 2354384-2355778
NCBI BlastP on this gene
C7A99_11875
UTP--glucose-1-phosphate uridylyltransferase
Accession: AVS47394
Location: 2355953-2356846
NCBI BlastP on this gene
C7A99_11880
hypothetical protein
Accession: AVS47395
Location: 2356882-2357145
NCBI BlastP on this gene
C7A99_11885
dTDP-glucose 4,6-dehydratase
Accession: AVS47396
Location: 2357217-2358302

BlastP hit with rmlB
Percentage identity: 98 %
BlastP bit score: 616
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession: AVS47397
Location: 2358302-2359201

BlastP hit with rmlD
Percentage identity: 95 %
BlastP bit score: 595
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
C7A99_11895
glucose-1-phosphate thymidylyltransferase RfbA
Accession: AVS47398
Location: 2359259-2360137

BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 597
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
C7A99_11900
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession: AVS47399
Location: 2360142-2360675

BlastP hit with rmlC
Percentage identity: 68 %
BlastP bit score: 242
Sequence coverage: 96 %
E-value: 4e-78

NCBI BlastP on this gene
rfbC
flippase
Accession: AVS47400
Location: 2360660-2361949
NCBI BlastP on this gene
C7A99_11910
UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)
Accession: AVS47401
Location: 2361961-2363094
NCBI BlastP on this gene
C7A99_11915
glycosyl transferase family 2
Accession: AVS47402
Location: 2363162-2364235
NCBI BlastP on this gene
C7A99_11920
EpsG family protein
Accession: AVS47403
Location: 2364427-2365446
NCBI BlastP on this gene
C7A99_11925
glycosyltransferase family 2 protein
Accession: AVS47404
Location: 2365421-2366386

BlastP hit with wbwV
Percentage identity: 35 %
BlastP bit score: 164
Sequence coverage: 100 %
E-value: 2e-44

NCBI BlastP on this gene
C7A99_11930
glycosyltransferase family 1 protein
Accession: AVS47405
Location: 2366388-2367533
NCBI BlastP on this gene
C7A99_11935
phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating)
Accession: AVS47406
Location: 2367768-2369174
NCBI BlastP on this gene
C7A99_11940
hypothetical protein
Accession: AVS47407
Location: 2369193-2369414
NCBI BlastP on this gene
C7A99_11945
IS200/IS605 family transposase
Accession: AVS47408
Location: 2369320-2369829
NCBI BlastP on this gene
C7A99_11950
UDP-glucose 6-dehydrogenase
Accession: AVS47409
Location: 2370132-2371298
NCBI BlastP on this gene
C7A99_11955
22. : KY115225 Escherichia coli O1:H20 O1-variant O-antigen gene cluster     Total score: 6.5     Cumulative Blast bit score: 2213
UTP--glucose-1-phosphate uridylyltransferase subunit GalF
Accession: AQU71747
Location: 12252-12848
NCBI BlastP on this gene
galF
dTDP-glucose-4,6-dehydratase
Accession: AQU71746
Location: 10794-11879

BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 609
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlB
dTDP-4-dehydrorhamnose reductase
Accession: AQU71745
Location: 9895-10794

BlastP hit with rmlD
Percentage identity: 96 %
BlastP bit score: 602
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlD
glucose-1-phosphate thymidylyltransferase
Accession: AQU71744
Location: 8959-9837

BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 596
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession: AQU71743
Location: 8421-8954

BlastP hit with rmlC
Percentage identity: 68 %
BlastP bit score: 242
Sequence coverage: 96 %
E-value: 4e-78

NCBI BlastP on this gene
rmlC
O-antigen transporter Wzx
Accession: AQU71742
Location: 7147-8424
NCBI BlastP on this gene
wzx
UDP-N-acetylglucosamine 2-epimerase
Accession: AQU71741
Location: 6002-7135
NCBI BlastP on this gene
mnaA
hypothetical protein
Accession: AQU71740
Location: 4861-5934
NCBI BlastP on this gene
AQU71740
O-antigen polymerase
Accession: AQU71739
Location: 3650-4669
NCBI BlastP on this gene
wzy
glycerol-3-phosphate cytidylyltransferase
Accession: AQU71738
Location: 2710-3675

BlastP hit with wbwV
Percentage identity: 35 %
BlastP bit score: 164
Sequence coverage: 100 %
E-value: 2e-44

NCBI BlastP on this gene
AQU71738
galactosyltransferase WbgM
Accession: AQU71737
Location: 1563-2765
NCBI BlastP on this gene
wbgM
hypothetical protein
Accession: AQU71736
Location: 1219-1419
NCBI BlastP on this gene
AQU71736
23. : KJ778804 Escherichia coli strain P 9b serotype O69:K-:H38 O-antigen gene cluster     Total score: 6.5     Cumulative Blast bit score: 2208
dTDP-glucose 4,6-dehydratase
Accession: AIG62806
Location: 108-1193

BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 612
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlB
dTDP-4-dehydrorhamnose reductase
Accession: AIG62805
Location: 1193-2092

BlastP hit with rmlD
Percentage identity: 96 %
BlastP bit score: 601
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlD
glucose-1-phosphate thymidylyltransferase
Accession: AIG62804
Location: 2150-3028

BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 597
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession: AIG62803
Location: 3033-3578

BlastP hit with rmlC
Percentage identity: 64 %
BlastP bit score: 236
Sequence coverage: 99 %
E-value: 2e-75

NCBI BlastP on this gene
rmlC
coenzyme F420-reducing hydrogenase subunit beta
Accession: AIG62802
Location: 3596-4951
NCBI BlastP on this gene
AIG62802
O-antigen flippase
Accession: AIG62801
Location: 4956-6470
NCBI BlastP on this gene
wzx
polysaccharide pyruvyl transferase
Accession: AIG62800
Location: 6467-7600
NCBI BlastP on this gene
AIG62800
glycosyl transferase family 2
Accession: AIG62799
Location: 7605-8489
NCBI BlastP on this gene
wfgH
O-antigen polymerase
Accession: AIG62798
Location: 8518-9633
NCBI BlastP on this gene
wzy
glycosyl transferase family 2
Accession: AIG62797
Location: 9653-10561

BlastP hit with wbwV
Percentage identity: 35 %
BlastP bit score: 162
Sequence coverage: 99 %
E-value: 1e-43

NCBI BlastP on this gene
AIG62797
glycosyl transferase
Accession: AIG62796
Location: 10564-11712
NCBI BlastP on this gene
epsD
acyltransferase family protein
Accession: AIG62795
Location: 11732-12715
NCBI BlastP on this gene
AIG62795
24. : AB812028 Escherichia coli genes for O-antigen biosynthetic locus     Total score: 6.5     Cumulative Blast bit score: 2208
colanic acid biosynthesis protein
Accession: BAQ01159
Location: 1-906
NCBI BlastP on this gene
wcaM
UTP-glucose-1-phosphate uridylyltransferase
Accession: BAQ01160
Location: 1069-1974
NCBI BlastP on this gene
galF
dTDP-glucose 4,6 dehydratase
Accession: BAQ01161
Location: 2346-3431

BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 612
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlB
dTDP-4-dehydrorhamnose reductase
Accession: BAQ01162
Location: 3431-4330

BlastP hit with rmlD
Percentage identity: 96 %
BlastP bit score: 601
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlD
glucose-1-phosphate thymidylyltransferase
Accession: BAQ01163
Location: 4388-5266

BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 597
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession: BAQ01164
Location: 5271-5816

BlastP hit with rmlC
Percentage identity: 64 %
BlastP bit score: 236
Sequence coverage: 99 %
E-value: 2e-75

NCBI BlastP on this gene
rmlC
putative coenzyme F420 hydrogenase/dehydrogenae beta subunit
Accession: BAQ01165
Location: 5834-7189
NCBI BlastP on this gene
BAQ01165
O-antigen flippase
Accession: BAQ01166
Location: 7194-8708
NCBI BlastP on this gene
wzx
putative pyruvyl transferase
Accession: BAQ01167
Location: 8705-9838
NCBI BlastP on this gene
BAQ01167
putative glycosyltransferase
Accession: BAQ01168
Location: 9843-10727
NCBI BlastP on this gene
BAQ01168
O-antigen polymerase
Accession: BAQ01169
Location: 10756-11871
NCBI BlastP on this gene
wzy
putative glycosyltransferase
Accession: BAQ01170
Location: 11891-12799

BlastP hit with wbwV
Percentage identity: 35 %
BlastP bit score: 162
Sequence coverage: 99 %
E-value: 2e-43

NCBI BlastP on this gene
BAQ01170
putative glycosyltransferase
Accession: BAQ01171
Location: 12802-13950
NCBI BlastP on this gene
BAQ01171
putative acetyltransferase
Accession: BAQ01172
Location: 13970-14995
NCBI BlastP on this gene
BAQ01172
6-phosphogluconate dehydrogenase
Accession: BAQ01173
Location: 15134-16540
NCBI BlastP on this gene
gnd
25. : AB812052 Escherichia coli genes for O-antigen biosynthetic locus     Total score: 6.5     Cumulative Blast bit score: 2204
colanic acid biosynthesis protein
Accession: BAQ01573
Location: 3-863
NCBI BlastP on this gene
wcaM
transposase of ISEc27
Accession: BAQ01574
Location: 1784-2194
NCBI BlastP on this gene
BAQ01574
UDP-N-acetylglucosamine 4-epimerase
Accession: BAQ01575
Location: 2357-3352
NCBI BlastP on this gene
gne
UTP-glucose-1-phosphate uridylyltransferase
Accession: BAQ01576
Location: 3595-4488
NCBI BlastP on this gene
galF
hypothetical protein
Accession: BAQ01577
Location: 4525-4788
NCBI BlastP on this gene
BAQ01577
dTDP-glucose 4,6 dehydratase
Accession: BAQ01578
Location: 4861-5946

BlastP hit with rmlB
Percentage identity: 98 %
BlastP bit score: 611
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlB
dTDP-4-dehydrorhamnose reductase
Accession: BAQ01579
Location: 5946-6845

BlastP hit with rmlD
Percentage identity: 97 %
BlastP bit score: 603
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlD
glucose-1-phosphate thymidylyltransferase
Accession: BAQ01580
Location: 6903-7781

BlastP hit with rmlA
Percentage identity: 99 %
BlastP bit score: 600
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession: BAQ01581
Location: 7786-8346

BlastP hit with rmlC
Percentage identity: 66 %
BlastP bit score: 239
Sequence coverage: 96 %
E-value: 7e-77

NCBI BlastP on this gene
rmlC
O-antigen flippase
Accession: BAQ01582
Location: 8359-9840
NCBI BlastP on this gene
wzx
putative glycosyltransferase
Accession: BAQ01583
Location: 9837-10682
NCBI BlastP on this gene
BAQ01583
O-antigen polymerase
Accession: BAQ01584
Location: 10666-11925
NCBI BlastP on this gene
wzy
putative glycosyltransferase
Accession: BAQ01585
Location: 11927-12718
NCBI BlastP on this gene
BAQ01585
putative glycosyltransferase
Accession: BAQ01586
Location: 12693-13613

BlastP hit with wbwV
Percentage identity: 35 %
BlastP bit score: 151
Sequence coverage: 95 %
E-value: 1e-39

NCBI BlastP on this gene
BAQ01586
putative glycosyltransferase
Accession: BAQ01587
Location: 13625-14728
NCBI BlastP on this gene
BAQ01587
6-phosphogluconate dehydrogenase
Accession: BAQ01588
Location: 14886-16292
NCBI BlastP on this gene
gnd
UDP-glucose 6-dehydrogenase
Accession: BAQ01589
Location: 16541-17707
NCBI BlastP on this gene
ugd
O-antigen chain length determinant protein
Accession: BAQ01590
Location: 17797-18831
NCBI BlastP on this gene
wzz
26. : CP015240 Escherichia coli strain 2011C-3911     Total score: 6.5     Cumulative Blast bit score: 2199
colanic acid biosynthesis glycosyltransferase WcaL
Accession: ANE58343
Location: 129503-130723
NCBI BlastP on this gene
A5956_00725
colanic acid biosynthesis protein WcaM
Accession: ANE58342
Location: 128098-129492
NCBI BlastP on this gene
wcaM
GalU regulator GalF
Accession: ANE58341
Location: 127030-127923
NCBI BlastP on this gene
A5956_00715
dTDP-glucose 4,6-dehydratase
Accession: ANE58340
Location: 125572-126657

BlastP hit with rmlB
Percentage identity: 98 %
BlastP bit score: 612
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
A5956_00710
dTDP-4-dehydrorhamnose reductase
Accession: ANE58339
Location: 124673-125572

BlastP hit with rmlD
Percentage identity: 94 %
BlastP bit score: 590
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
A5956_00705
glucose-1-phosphate thymidylyltransferase
Accession: ANE58338
Location: 123737-124615

BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 593
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
A5956_00700
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession: ANE58337
Location: 123187-123732

BlastP hit with rmlC
Percentage identity: 68 %
BlastP bit score: 246
Sequence coverage: 97 %
E-value: 1e-79

NCBI BlastP on this gene
A5956_00695
hypothetical protein
Accession: ANE58336
Location: 121975-123090
NCBI BlastP on this gene
A5956_00690
hypothetical protein
Accession: ANE58335
Location: 120994-121935
NCBI BlastP on this gene
A5956_00685
hypothetical protein
Accession: ANE58334
Location: 119908-120990
NCBI BlastP on this gene
A5956_00680
hypothetical protein
Accession: ANE58333
Location: 118626-119906
NCBI BlastP on this gene
A5956_00675
hypothetical protein
Accession: ANE58332
Location: 117727-118617
NCBI BlastP on this gene
A5956_00670
hypothetical protein
Accession: ANE58331
Location: 116772-117665

BlastP hit with wbwV
Percentage identity: 31 %
BlastP bit score: 158
Sequence coverage: 100 %
E-value: 2e-42

NCBI BlastP on this gene
A5956_00665
glycosyl hydrolase family 1
Accession: ANE58330
Location: 115681-116775
NCBI BlastP on this gene
A5956_00660
phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating)
Accession: ANE58329
Location: 114137-115543
NCBI BlastP on this gene
A5956_00655
UDP-glucose 6-dehydrogenase
Accession: ANE58328
Location: 112722-113888
NCBI BlastP on this gene
A5956_00650
27. : CP034738 Escherichia coli strain L65 chromosome     Total score: 6.5     Cumulative Blast bit score: 2176
colanic acid biosynthesis protein WcaM
Accession: AZU84292
Location: 1285045-1286439
NCBI BlastP on this gene
wcaM
N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans, octacis-undecaprenol 4-epimerase
Accession: AZU84291
Location: 1283892-1284887
NCBI BlastP on this gene
EM854_06435
GalU regulator GalF
Accession: AZU84290
Location: 1282756-1283649
NCBI BlastP on this gene
galF
dTDP-glucose 4,6-dehydratase
Accession: AZU84289
Location: 1281299-1282384

BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 609
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession: AZU84288
Location: 1280400-1281299

BlastP hit with rmlD
Percentage identity: 94 %
BlastP bit score: 591
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
EM854_06420
glucose-1-phosphate thymidylyltransferase RfbA
Accession: AZU84287
Location: 1279464-1280342

BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 595
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rfbA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession: AZU84286
Location: 1278905-1279459

BlastP hit with rmlC
Percentage identity: 67 %
BlastP bit score: 238
Sequence coverage: 96 %
E-value: 2e-76

NCBI BlastP on this gene
rfbC
EpsG family protein
Accession: AZU84285
Location: 1277720-1278841
NCBI BlastP on this gene
EM854_06405
glycosyltransferase family 2 protein
Accession: AZU84284
Location: 1276733-1277677
NCBI BlastP on this gene
EM854_06400
glycosyltransferase family 1 protein
Accession: AZU84283
Location: 1275634-1276725
NCBI BlastP on this gene
EM854_06395
hypothetical protein
Accession: AZU84282
Location: 1274376-1275641
NCBI BlastP on this gene
EM854_06390
hypothetical protein
Accession: AZU84281
Location: 1273491-1274339
NCBI BlastP on this gene
EM854_06385
rhamnosyltransferase
Accession: AZU87397
Location: 1272569-1273471

BlastP hit with wbwV
Percentage identity: 37 %
BlastP bit score: 143
Sequence coverage: 93 %
E-value: 1e-36

NCBI BlastP on this gene
EM854_06380
glycosyltransferase family 1 protein
Accession: AZU84280
Location: 1271454-1272557
NCBI BlastP on this gene
EM854_06375
NADP-dependent phosphogluconate dehydrogenase
Accession: AZU84279
Location: 1269890-1271296
NCBI BlastP on this gene
gndA
UDP-glucose 6-dehydrogenase
Accession: AZU84278
Location: 1268476-1269642
NCBI BlastP on this gene
EM854_06365
28. : LC177551 Escherichia coli DNA, O-antigen biosynthesis gene cluster OgN14, strain: E167.     Total score: 6.5     Cumulative Blast bit score: 2174
colanic acid biosynthesis protein
Accession: BAV90491
Location: 14-1408
NCBI BlastP on this gene
wcaM
UDP-N-acetylglucosamine 4-epimerase
Accession: BAV90492
Location: 1566-2561
NCBI BlastP on this gene
gne
UTP-glucose-1-phosphate uridylyltransferase
Accession: BAV90493
Location: 2793-3686
NCBI BlastP on this gene
galF
dTDP-glucose 4,6 dehydratase
Accession: BAV90494
Location: 4058-5143

BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 609
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlB
dTDP-4-dehydrorhamnose reductase
Accession: BAV90495
Location: 5143-6042

BlastP hit with rmlD
Percentage identity: 94 %
BlastP bit score: 592
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlD
glucose-1-phosphate thymidylyltransferase
Accession: BAV90496
Location: 6100-6978

BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 595
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession: BAV90497
Location: 6983-7537

BlastP hit with rmlC
Percentage identity: 66 %
BlastP bit score: 236
Sequence coverage: 96 %
E-value: 1e-75

NCBI BlastP on this gene
rmlC
O-antigen polymerase
Accession: BAV90498
Location: 7568-8722
NCBI BlastP on this gene
wzy
putative glycosyltranslocase
Accession: BAV90499
Location: 8765-9709
NCBI BlastP on this gene
BAV90499
putative glycosyltranslocase
Accession: BAV90500
Location: 9717-10808
NCBI BlastP on this gene
BAV90500
O-antigen flippase
Accession: BAV90501
Location: 10801-12066
NCBI BlastP on this gene
wzx
putative glycosyltranslocase
Accession: BAV90502
Location: 12103-12951
NCBI BlastP on this gene
BAV90502
putative glycosyltranslocase
Accession: BAV90503
Location: 12962-13873

BlastP hit with wbwV
Percentage identity: 36 %
BlastP bit score: 142
Sequence coverage: 93 %
E-value: 3e-36

NCBI BlastP on this gene
BAV90503
putative glycosyltranslocase
Accession: BAV90504
Location: 13885-14988
NCBI BlastP on this gene
BAV90504
6-phosphogluconate dehydrogenase
Accession: BAV90505
Location: 15146-16552
NCBI BlastP on this gene
gnd
UDP-glucose 6-dehydrogenase
Accession: BAV90506
Location: 16774-17967
NCBI BlastP on this gene
ugd
29. : DQ109551 Escherichia coli O138 O-antigen gene cluster     Total score: 5.5     Cumulative Blast bit score: 2059
dTDP-glucose 4,6-dehydratase
Accession: AAZ85703
Location: 1137-2222

BlastP hit with rmlB
Percentage identity: 98 %
BlastP bit score: 617
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlB
dTDP-6-deoxy-L-mannose-dehydrogenase
Accession: AAZ85704
Location: 2222-3121

BlastP hit with rmlD
Percentage identity: 96 %
BlastP bit score: 600
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlD
glucose-1-phosphate thymidylyltransferase
Accession: AAZ85705
Location: 3179-4057

BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 597
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlA
dTDP-6-deoxy-D-glucose-3,5 epimerase
Accession: AAZ85706
Location: 4062-4598

BlastP hit with rmlC
Percentage identity: 66 %
BlastP bit score: 245
Sequence coverage: 100 %
E-value: 3e-79

NCBI BlastP on this gene
rmlC
O-antigen flippase
Accession: AAZ85707
Location: 4632-5909
NCBI BlastP on this gene
wzx
glycosyltransferase
Accession: AAZ85708
Location: 5899-6855
NCBI BlastP on this gene
wfaF
glycosyltransferase
Accession: AAZ85709
Location: 6848-7924
NCBI BlastP on this gene
wfaG
UDP-N-acetyl-D-galactosamine dehydrogenase
Accession: AAZ85710
Location: 7985-9262
NCBI BlastP on this gene
gna
GlcNAc-4-epimerase
Accession: AAZ85711
Location: 9264-10289
NCBI BlastP on this gene
gne
glycosyltransferase
Accession: AAZ85712
Location: 10333-11484
NCBI BlastP on this gene
wfaH
O-antigen polymerase
Accession: AAZ85713
Location: 11469-12680
NCBI BlastP on this gene
wzy
30. : LC177550 Escherichia coli DNA, O-antigen biosynthesis gene cluster OgN13, strain: E1682.     Total score: 5.5     Cumulative Blast bit score: 2058
colanic acid biosynthesis protein
Accession: BAV90473
Location: 14-1408
NCBI BlastP on this gene
wcaM
UTP-glucose-1-phosphate uridylyltransferase
Accession: BAV90474
Location: 1571-2476
NCBI BlastP on this gene
galF
dTDP-glucose 4,6 dehydratase
Accession: BAV90475
Location: 2847-3932

BlastP hit with rmlB
Percentage identity: 98 %
BlastP bit score: 614
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlB
dTDP-4-dehydrorhamnose reductase
Accession: BAV90476
Location: 3932-4831

BlastP hit with rmlD
Percentage identity: 97 %
BlastP bit score: 607
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlD
glucose-1-phosphate thymidylyltransferase
Accession: BAV90477
Location: 4889-5767

BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 595
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession: BAV90478
Location: 5772-6305

BlastP hit with rmlC
Percentage identity: 68 %
BlastP bit score: 242
Sequence coverage: 96 %
E-value: 4e-78

NCBI BlastP on this gene
rmlC
putative glycosyltranslocase
Accession: BAV90479
Location: 6314-7177
NCBI BlastP on this gene
BAV90479
O-antigen flippase
Accession: BAV90480
Location: 7164-8363
NCBI BlastP on this gene
wzx
putative glycosyltranslocase
Accession: BAV90481
Location: 8366-9139
NCBI BlastP on this gene
BAV90481
O-antigen polymerase
Accession: BAV90482
Location: 9136-10203
NCBI BlastP on this gene
wzy
putative glycosyltranslocase
Accession: BAV90483
Location: 10200-11042
NCBI BlastP on this gene
BAV90483
putative glycosyltranslocase
Accession: BAV90484
Location: 11039-11779
NCBI BlastP on this gene
BAV90484
putative glycosyltranslocase
Accession: BAV90485
Location: 11767-12909
NCBI BlastP on this gene
BAV90485
6-phosphogluconate dehydrogenase
Accession: BAV90486
Location: 13015-14421
NCBI BlastP on this gene
gnd
31. : LC125928 Escherichia coli DNA, O-antigen biosynthesis gene cluster, strain: 102755.     Total score: 5.5     Cumulative Blast bit score: 2057
colanic acid biosynthesis protein
Accession: BAU71565
Location: 468-1862
NCBI BlastP on this gene
wcaM
UTP-glucose-1-phosphate uridylyltransferase
Accession: BAU71566
Location: 2025-2930
NCBI BlastP on this gene
galF
dTDP-glucose 4,6 dehydratase
Accession: BAU71567
Location: 3302-4387

BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 611
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlB
dTDP-4-dehydrorhamnose reductase
Accession: BAU71568
Location: 4387-5286

BlastP hit with rmlD
Percentage identity: 97 %
BlastP bit score: 604
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlD
glucose-1-phosphate thymidylyltransferase
Accession: BAU71569
Location: 5344-6222

BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 597
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession: BAU71570
Location: 6227-6775

BlastP hit with rmlC
Percentage identity: 69 %
BlastP bit score: 245
Sequence coverage: 96 %
E-value: 4e-79

NCBI BlastP on this gene
rmlC
O-antigen flippase
Accession: BAU71571
Location: 6783-8063
NCBI BlastP on this gene
wzx
O-antigen polymerase
Accession: BAU71572
Location: 8032-9201
NCBI BlastP on this gene
wzy
putative glycosyltranslocase
Accession: BAU71573
Location: 9194-10336
NCBI BlastP on this gene
BAU71573
putative glycosyltranslocase
Accession: BAU71574
Location: 10340-11371
NCBI BlastP on this gene
BAU71574
putative glycosyltranslocase
Accession: BAU71575
Location: 11368-12450
NCBI BlastP on this gene
BAU71575
putative glycosyltranslocase
Accession: BAU71576
Location: 12459-13229
NCBI BlastP on this gene
BAU71576
mannose-1-phosphate guanylyltransferase
Accession: BAU71577
Location: 13244-14611
NCBI BlastP on this gene
manC
32. : CP047576 Escherichia coli strain 94EC chromosome     Total score: 5.5     Cumulative Blast bit score: 2056
undecaprenyl-phosphate glucose phosphotransferase
Accession: QHI55063
Location: 4599201-4600595
NCBI BlastP on this gene
wcaJ
M-antigen undecaprenyl disphosphate flippase
Accession: QHI55064
Location: 4600597-4602075
NCBI BlastP on this gene
wzxC
colanic acid biosynthesis pyruvyl transferase WcaK
Accession: QHI55065
Location: 4602255-4603535
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession: QHI55066
Location: 4603532-4604752
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession: QHI55067
Location: 4604763-4606157
NCBI BlastP on this gene
wcaM
UTP--glucose-1-phosphate uridylyltransferase GalF
Accession: QHI55068
Location: 4606332-4607225
NCBI BlastP on this gene
galF
dTDP-glucose 4,6-dehydratase
Accession: QHI55069
Location: 4607597-4608682

BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 610
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession: QHI55070
Location: 4608682-4609581

BlastP hit with rmlD
Percentage identity: 97 %
BlastP bit score: 607
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rfbD
glucose-1-phosphate thymidylyltransferase RfbA
Accession: QHI55071
Location: 4609639-4610517

BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 597
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rfbA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession: QHI55072
Location: 4610522-4611055

BlastP hit with rmlC
Percentage identity: 68 %
BlastP bit score: 242
Sequence coverage: 96 %
E-value: 4e-78

NCBI BlastP on this gene
rfbC
hypothetical protein
Accession: QHI55073
Location: 4611064-4611927
NCBI BlastP on this gene
GUJ28_21955
oligosaccharide flippase family protein
Accession: QHI55074
Location: 4611914-4613113
NCBI BlastP on this gene
GUJ28_21960
DUF616 domain-containing protein
Accession: QHI55435
Location: 4613128-4613889
NCBI BlastP on this gene
GUJ28_21965
hypothetical protein
Accession: QHI55075
Location: 4614006-4614953
NCBI BlastP on this gene
GUJ28_21970
glycosyltransferase
Accession: QHI55076
Location: 4614953-4615792
NCBI BlastP on this gene
GUJ28_21975
glycosyltransferase
Accession: QHI55077
Location: 4615804-4616529
NCBI BlastP on this gene
GUJ28_21980
glycosyltransferase
Accession: QHI55078
Location: 4616517-4617659
NCBI BlastP on this gene
GUJ28_21985
NADP-dependent phosphogluconate dehydrogenase
Accession: QHI55079
Location: 4617765-4619171
NCBI BlastP on this gene
gndA
33. : KJ778803 Escherichia coli strain H 304 serotype O34:H10 O-antigen gene cluster     Total score: 5.5     Cumulative Blast bit score: 2054
dTDP-glucose 4,6-dehydratase
Accession: AIG62782
Location: 117-1202

BlastP hit with rmlB
Percentage identity: 98 %
BlastP bit score: 614
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlB
dTDP-4-dehydrorhamnose reductase
Accession: AIG62783
Location: 1202-2101

BlastP hit with rmlD
Percentage identity: 98 %
BlastP bit score: 608
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlD
glucose-1-phosphate thymidylyltransferase 1
Accession: AIG62784
Location: 2159-3037

BlastP hit with rmlA
Percentage identity: 96 %
BlastP bit score: 588
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession: AIG62785
Location: 3042-3587

BlastP hit with rmlC
Percentage identity: 65 %
BlastP bit score: 244
Sequence coverage: 100 %
E-value: 1e-78

NCBI BlastP on this gene
rmlC
O-antigen flippase
Accession: AIG62786
Location: 3589-4845
NCBI BlastP on this gene
wzx
UDP-galactopyranose mutase
Accession: AIG62787
Location: 4848-5930
NCBI BlastP on this gene
glf
hypothetical protein
Accession: AIG62788
Location: 5940-6932
NCBI BlastP on this gene
AIG62788
O-antigen polymerase
Accession: AIG62789
Location: 6967-7989
NCBI BlastP on this gene
wzy
UDP-Glc:alpha-D-GlcNAc-diphosphoundecaprenol beta-1,3-glucosyltransferase
Accession: AIG62790
Location: 7986-8927
NCBI BlastP on this gene
wfgD
N-acetylgalactosamine-N,
Accession: AIG62791
Location: 8915-10024
NCBI BlastP on this gene
pglJ
GDP-mannose-dependent alpha-(1-2)-phosphatidylinositol mannosyltransferase
Accession: AIG62792
Location: 10028-11125
NCBI BlastP on this gene
pimA
34. : KJ778790 Escherichia coli strain E 49 serotype O79:H40 O-antigen gene cluster     Total score: 5.5     Cumulative Blast bit score: 2054
dTDP-glucose 4,6-dehydratase
Accession: AIG62643
Location: 107-1192

BlastP hit with rmlB
Percentage identity: 98 %
BlastP bit score: 611
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlB
dTDP-4-dehydrorhamnose reductase
Accession: AIG62644
Location: 1192-2091

BlastP hit with rmlD
Percentage identity: 98 %
BlastP bit score: 608
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlD
glucose-1-phosphate thymidylyltransferase 1
Accession: AIG62645
Location: 2149-3027

BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 595
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession: AIG62646
Location: 3032-3568

BlastP hit with rmlC
Percentage identity: 66 %
BlastP bit score: 240
Sequence coverage: 99 %
E-value: 3e-77

NCBI BlastP on this gene
rmlC
glycosyl transferase family 2
Accession: AIG62647
Location: 3583-4344
NCBI BlastP on this gene
wbdT
O-antigen polymerase
Accession: AIG62648
Location: 4348-5439
NCBI BlastP on this gene
wzy
glycosyl transferase
Accession: AIG62649
Location: 5432-6232
NCBI BlastP on this gene
wbdU
O-antigen flippase
Accession: AIG62650
Location: 6232-7392
NCBI BlastP on this gene
wzx
hypothetical protein
Accession: AIG62651
Location: 7376-7978
NCBI BlastP on this gene
wbdV
glycosyl transferase
Accession: AIG62652
Location: 7975-9057
NCBI BlastP on this gene
wbdW
glycosyl transferase family 2
Accession: AIG62653
Location: 9054-9815
NCBI BlastP on this gene
wbdX
mannose-1-phosphate guanylyltransferase
Accession: AIG62654
Location: 9827-11227
NCBI BlastP on this gene
manC
35. : EU294162 Escherichia coli serotype O79 O antigen gene cluster     Total score: 5.5     Cumulative Blast bit score: 2054
RmlB
Accession: ACA24734
Location: 107-1192

BlastP hit with rmlB
Percentage identity: 98 %
BlastP bit score: 611
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlB
RmlD
Accession: ACA24735
Location: 1192-2091

BlastP hit with rmlD
Percentage identity: 98 %
BlastP bit score: 608
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlD
RmlA
Accession: ACA24736
Location: 2149-3027

BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 595
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlA
RmlC
Accession: ACA24737
Location: 3032-3568

BlastP hit with rmlC
Percentage identity: 66 %
BlastP bit score: 240
Sequence coverage: 99 %
E-value: 3e-77

NCBI BlastP on this gene
rmlC
WbdT
Accession: ACA24738
Location: 3583-4344
NCBI BlastP on this gene
wbdT
Wzy
Accession: ACA24739
Location: 4348-5439
NCBI BlastP on this gene
wzy
WbdU
Accession: ACA24740
Location: 5432-6232
NCBI BlastP on this gene
wbdU
Wzx
Accession: ACA24741
Location: 6232-7392
NCBI BlastP on this gene
wzx
WbdV
Accession: ACA24742
Location: 7376-7978
NCBI BlastP on this gene
wbdV
WbdW
Accession: ACA24743
Location: 7975-9057
NCBI BlastP on this gene
wbdW
WbdX
Accession: ACA24744
Location: 9054-9815
NCBI BlastP on this gene
wbdX
ManC
Accession: ACA24745
Location: 9827-11227
NCBI BlastP on this gene
manC
36. : AB811612 Escherichia coli DNA, O-antigen biosynthetic locus, strain: H304.     Total score: 5.5     Cumulative Blast bit score: 2054
not annotated
Accession: BAQ00803
Location: 3-893
NCBI BlastP on this gene
wcaM
UTP-glucose-1-phosphate uridylyltransferase
Accession: BAQ00804
Location: 1056-1961
NCBI BlastP on this gene
galF
dTDP-glucose 4,6 dehydratase
Accession: BAQ00805
Location: 2333-3418

BlastP hit with rmlB
Percentage identity: 98 %
BlastP bit score: 614
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlB
dTDP-4-dehydrorhamnose reductase
Accession: BAQ00806
Location: 3418-4317

BlastP hit with rmlD
Percentage identity: 98 %
BlastP bit score: 608
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlD
glucose-1-phosphate thymidylyltransferase
Accession: BAQ00807
Location: 4375-5253

BlastP hit with rmlA
Percentage identity: 96 %
BlastP bit score: 588
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession: BAQ00808
Location: 5258-5803

BlastP hit with rmlC
Percentage identity: 65 %
BlastP bit score: 244
Sequence coverage: 100 %
E-value: 1e-78

NCBI BlastP on this gene
rmlC
O-antigen flippase
Accession: BAQ00809
Location: 5805-7061
NCBI BlastP on this gene
wzx
UDP-galactopyranose mutase
Accession: BAQ00810
Location: 7058-8146
NCBI BlastP on this gene
glf
hypothetical protein
Accession: BAQ00811
Location: 8156-9148
NCBI BlastP on this gene
BAQ00811
O-antigen polymerase
Accession: BAQ00812
Location: 9183-10205
NCBI BlastP on this gene
wzy
putative glycosyltransferase
Accession: BAQ00813
Location: 10202-11143
NCBI BlastP on this gene
BAQ00813
putative glycosyltransferase
Accession: BAQ00814
Location: 11131-12240
NCBI BlastP on this gene
BAQ00814
putative glycosyltransferase
Accession: BAQ00815
Location: 12244-13341
NCBI BlastP on this gene
BAQ00815
37. : LR134191 Escherichia coli strain NCTC5934 genome assembly, chromosome: 1.     Total score: 5.5     Cumulative Blast bit score: 2053
putative colanic biosynthesis UDP-glucose lipid carrier transferase
Accession: VEB55909
Location: 1767168-1768562
NCBI BlastP on this gene
wcaJ
putative flippase (Putative export protein)
Accession: VEB55911
Location: 1768564-1770042
NCBI BlastP on this gene
wzxC
Colanic acid biosynthesis protein
Accession: VEB55913
Location: 1770222-1771502
NCBI BlastP on this gene
wcaK
putative colanic acid biosynthesis glycosyltransferase
Accession: VEB55915
Location: 1771499-1772719
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein
Accession: VEB55917
Location: 1772730-1774124
NCBI BlastP on this gene
wcaM
UTP--glucose-1-phosphate uridylyltransferase subunit GalF
Accession: VEB55919
Location: 1774299-1775174
NCBI BlastP on this gene
galF
dTDP-D-glucose 4,6-dehydratase rmlB
Accession: VEB55921
Location: 1775565-1776650

BlastP hit with rmlB
Percentage identity: 98 %
BlastP bit score: 611
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlB
dTDP-4-dehydrorhamnose reductase
Accession: VEB55923
Location: 1776650-1777549

BlastP hit with rmlD
Percentage identity: 97 %
BlastP bit score: 607
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlD
glucose-1-phosphate thymidylyltransferase
Accession: VEB55925
Location: 1777607-1778485

BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 595
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rfbA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession: VEB55927
Location: 1778490-1779026

BlastP hit with rmlC
Percentage identity: 66 %
BlastP bit score: 240
Sequence coverage: 99 %
E-value: 3e-77

NCBI BlastP on this gene
rmlC
N-glycosyltransferase
Accession: VEB55929
Location: 1779041-1779802
NCBI BlastP on this gene
NCTC5934_01741
Uncharacterised protein
Accession: VEB55931
Location: 1779806-1780897
NCBI BlastP on this gene
NCTC5934_01742
Uncharacterised protein
Accession: VEB55933
Location: 1780890-1781690
NCBI BlastP on this gene
NCTC5934_01743
Uncharacterised protein
Accession: VEB55935
Location: 1781690-1782766
NCBI BlastP on this gene
NCTC5934_01744
Exopolysaccharide biosynthesis protein
Accession: VEB55937
Location: 1782835-1783365
NCBI BlastP on this gene
NCTC5934_01745
Uncharacterised protein
Accession: VEB55939
Location: 1784030-1784518
NCBI BlastP on this gene
NCTC5934_01746
Glycosyltransferase
Accession: VEB55941
Location: 1784515-1785276
NCBI BlastP on this gene
wbdN
putative mannose-1-phosphate guanylyltransferase
Accession: VEB55943
Location: 1785288-1786688
NCBI BlastP on this gene
rfbM
38. : JN871614 Escherichia coli strain R32_14_1F O antigen gene cluster     Total score: 5.5     Cumulative Blast bit score: 2053
rmlB
Accession: AFD21088
Location: 189-1082

BlastP hit with rmlB
Percentage identity: 98 %
BlastP bit score: 611
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
AFD21088
rmlD
Accession: AFD21089
Location: 1082-1981

BlastP hit with rmlD
Percentage identity: 97 %
BlastP bit score: 602
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
AFD21089
rmlA
Accession: AFD21090
Location: 2039-2917

BlastP hit with rmlA
Percentage identity: 99 %
BlastP bit score: 598
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
AFD21090
rmlC
Accession: AFD21091
Location: 2922-3464

BlastP hit with rmlC
Percentage identity: 66 %
BlastP bit score: 242
Sequence coverage: 100 %
E-value: 4e-78

NCBI BlastP on this gene
AFD21091
wzx
Accession: AFD21092
Location: 3464-4726
NCBI BlastP on this gene
AFD21092
wzy
Accession: AFD21093
Location: 4792-5814
NCBI BlastP on this gene
AFD21093
wbuA
Accession: AFD21094
Location: 5830-6624
NCBI BlastP on this gene
AFD21094
fnl1
Accession: AFD21095
Location: 6636-7670
NCBI BlastP on this gene
AFD21095
fnl2
Accession: AFD21096
Location: 7654-8778
NCBI BlastP on this gene
AFD21096
fnl3
Accession: AFD21097
Location: 8793-9905
NCBI BlastP on this gene
AFD21097
wbuB
Accession: AFD21098
Location: 9905-11113
NCBI BlastP on this gene
AFD21098
39. : JN871613 Escherichia coli strain 94_0003 O antigen gene cluster     Total score: 5.5     Cumulative Blast bit score: 2053
rmlB
Accession: AFD21076
Location: 189-1082

BlastP hit with rmlB
Percentage identity: 98 %
BlastP bit score: 611
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
AFD21076
rmlD
Accession: AFD21077
Location: 1082-1981

BlastP hit with rmlD
Percentage identity: 97 %
BlastP bit score: 602
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
AFD21077
rmlA
Accession: AFD21078
Location: 2039-2917

BlastP hit with rmlA
Percentage identity: 99 %
BlastP bit score: 598
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
AFD21078
rmlC
Accession: AFD21079
Location: 2922-3464

BlastP hit with rmlC
Percentage identity: 66 %
BlastP bit score: 242
Sequence coverage: 100 %
E-value: 4e-78

NCBI BlastP on this gene
AFD21079
wzx
Accession: AFD21080
Location: 3464-4726
NCBI BlastP on this gene
AFD21080
wzy
Accession: AFD21081
Location: 4792-5814
NCBI BlastP on this gene
AFD21081
wbuA
Accession: AFD21082
Location: 5830-6624
NCBI BlastP on this gene
AFD21082
fnl1
Accession: AFD21083
Location: 6636-7670
NCBI BlastP on this gene
AFD21083
fnl2
Accession: AFD21084
Location: 7654-8778
NCBI BlastP on this gene
AFD21084
fnl3
Accession: AFD21085
Location: 8793-9905
NCBI BlastP on this gene
AFD21085
wbuB
Accession: AFD21086
Location: 9905-11113
NCBI BlastP on this gene
AFD21086
40. : MN172356 Escherichia coli strain 16-04178 O-antigen biosynthesis gene cluster     Total score: 5.5     Cumulative Blast bit score: 2052
GalF
Accession: QEE84054
Location: 79-972
NCBI BlastP on this gene
galF
RmlB
Accession: QEE84055
Location: 1345-2430

BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 610
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlB
RmlD
Accession: QEE84056
Location: 2430-3329

BlastP hit with rmlD
Percentage identity: 97 %
BlastP bit score: 605
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlD
RmlA
Accession: QEE84057
Location: 3387-4265

BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 594
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession: QEE84058
Location: 4270-4809

BlastP hit with rmlC
Percentage identity: 69 %
BlastP bit score: 243
Sequence coverage: 93 %
E-value: 2e-78

NCBI BlastP on this gene
QEE84058
DUF616 domain-containing protein
Accession: QEE84059
Location: 4826-5572
NCBI BlastP on this gene
QEE84059
EpsG family protein
Accession: QEE84060
Location: 5573-6553
NCBI BlastP on this gene
wzy
glycosyltransferase
Accession: QEE84061
Location: 6561-7397
NCBI BlastP on this gene
QEE84061
glycosyltransferase family 1 protein
Accession: QEE84062
Location: 7399-8400
NCBI BlastP on this gene
QEE84062
glycosyltransferase family 2 protein
Accession: QEE84063
Location: 8390-9184
NCBI BlastP on this gene
QEE84063
Gnd
Accession: QEE84064
Location: 9298-10704
NCBI BlastP on this gene
gnd
flippase
Accession: QEE84065
Location: 10840-12126
NCBI BlastP on this gene
wzx
41. : KY115226 Escherichia coli O1:H- hypothetical protein gene     Total score: 5.5     Cumulative Blast bit score: 2052
UTP--glucose-1-phosphate uridylyltransferase
Accession: AQU71761
Location: 16613-17209
NCBI BlastP on this gene
galF
dTDP-glucose 4,6-dehydratase
Accession: AQU71760
Location: 15156-16241

BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 612
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlB
dTDP-4-dehydrorhamnose reductase
Accession: AQU71759
Location: 14257-15156

BlastP hit with rmlD
Percentage identity: 96 %
BlastP bit score: 601
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlD
glucose-1-phosphate thymidylyltransferase
Accession: AQU71758
Location: 13321-14199

BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 597
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession: AQU71757
Location: 12783-13316

BlastP hit with rmlC
Percentage identity: 67 %
BlastP bit score: 242
Sequence coverage: 96 %
E-value: 4e-78

NCBI BlastP on this gene
rmlC
O-antigen flippase
Accession: AQU71756
Location: 11509-12786
NCBI BlastP on this gene
wzx
UDP-N-acetylglucosamine 2-epimerase
Accession: AQU71755
Location: 10361-11497
NCBI BlastP on this gene
mnaA
hypothetical protein
Accession: AQU71754
Location: 9222-10295
NCBI BlastP on this gene
AQU71754
glycosyl transferase family 2
Accession: AQU71753
Location: 6952-7872
NCBI BlastP on this gene
AQU71753
O-antigen polymerase
Accession: AQU71752
Location: 5830-6873
NCBI BlastP on this gene
wzy
putative glycosyl transferase
Accession: AQU71751
Location: 4764-5699
NCBI BlastP on this gene
AQU71751
42. : CP048025 Escherichia coli strain GZEC065 chromosome     Total score: 5.5     Cumulative Blast bit score: 2052
M-antigen undecaprenyl disphosphate flippase
Accession: QHS05199
Location: 1254387-1255865
NCBI BlastP on this gene
wzxC
colanic acid biosynthesis pyruvyl transferase WcaK
Accession: QHS05198
Location: 1252927-1254207
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession: QHS05197
Location: 1251710-1252930
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession: QHS05196
Location: 1250305-1251699
NCBI BlastP on this gene
wcaM
N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans, octacis-undecaprenol 4-epimerase
Accession: QHS05195
Location: 1249152-1250147
NCBI BlastP on this gene
GWG09_06190
UTP--glucose-1-phosphate uridylyltransferase GalF
Accession: QHS05194
Location: 1248016-1248909
NCBI BlastP on this gene
galF
dTDP-glucose 4,6-dehydratase
Accession: QHS05193
Location: 1246559-1247644

BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 611
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession: QHS05192
Location: 1245660-1246559

BlastP hit with rmlD
Percentage identity: 95 %
BlastP bit score: 600
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rfbD
glucose-1-phosphate thymidylyltransferase RfbA
Accession: QHS05191
Location: 1244724-1245602

BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 596
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rfbA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession: QHS05190
Location: 1244171-1244719

BlastP hit with rmlC
Percentage identity: 66 %
BlastP bit score: 245
Sequence coverage: 100 %
E-value: 3e-79

NCBI BlastP on this gene
rfbC
oligosaccharide repeat unit polymerase
Accession: QHS05189
Location: 1242913-1244142
NCBI BlastP on this gene
GWG09_06160
oligosaccharide flippase family protein
Accession: QHS05188
Location: 1241757-1242920
NCBI BlastP on this gene
GWG09_06155
glycosyltransferase family 2 protein
Accession: QHS05187
Location: 1240942-1241760
NCBI BlastP on this gene
GWG09_06150
hypothetical protein
Accession: QHS05186
Location: 1239777-1240667
NCBI BlastP on this gene
GWG09_06145
glycosyltransferase family 2 protein
Accession: QHS05185
Location: 1239007-1239759
NCBI BlastP on this gene
GWG09_06140
NADP-dependent phosphogluconate dehydrogenase
Accession: QHS05184
Location: 1237499-1238905
NCBI BlastP on this gene
gndA
UDP-glucose 6-dehydrogenase
Accession: QHS05183
Location: 1236086-1237252
NCBI BlastP on this gene
GWG09_06130
43. : CP043757 Escherichia coli strain CVM N55972 chromosome     Total score: 5.5     Cumulative Blast bit score: 2052
undecaprenyl-phosphate glucose phosphotransferase
Accession: QEP88340
Location: 1767064-1768458
NCBI BlastP on this gene
wcaJ
colanic acid biosynthesis pyruvyl transferase WcaK
Accession: QEP88341
Location: 1770213-1771493
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession: QEP88342
Location: 1771490-1772710
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession: QEP88343
Location: 1772721-1774115
NCBI BlastP on this gene
wcaM
UTP--glucose-1-phosphate uridylyltransferase GalF
Accession: QEP88344
Location: 1774290-1775183
NCBI BlastP on this gene
galF
dTDP-glucose 4,6-dehydratase
Accession: QEP88345
Location: 1775555-1776640

BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 612
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession: QEP88346
Location: 1776640-1777539

BlastP hit with rmlD
Percentage identity: 96 %
BlastP bit score: 601
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rfbD
glucose-1-phosphate thymidylyltransferase RfbA
Accession: QEP88347
Location: 1777597-1778475

BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 597
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rfbA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession: QEP88348
Location: 1778480-1779013

BlastP hit with rmlC
Percentage identity: 67 %
BlastP bit score: 242
Sequence coverage: 96 %
E-value: 4e-78

NCBI BlastP on this gene
rfbC
oligosaccharide flippase family protein
Accession: QEP88349
Location: 1778998-1780287
NCBI BlastP on this gene
F1L16_08405
UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)
Accession: QEP88350
Location: 1780299-1781435
NCBI BlastP on this gene
F1L16_08410
glycosyltransferase family 4 protein
Accession: QEP88351
Location: 1782042-1782572
NCBI BlastP on this gene
F1L16_08415
ISAs1 family transposase
Accession: F1L16_08420
Location: 1782820-1783853
NCBI BlastP on this gene
F1L16_08420
glycosyltransferase family 2 protein
Accession: QEP88352
Location: 1783920-1784840
NCBI BlastP on this gene
F1L16_08425
EpsG family protein
Accession: F1L16_08430
Location: 1784919-1785961
NCBI BlastP on this gene
F1L16_08430
44. : CP041435 Escherichia coli strain STEC309 chromosome     Total score: 5.5     Cumulative Blast bit score: 2052
undecaprenyl-phosphate glucose phosphotransferase
Accession: QHR26208
Location: 1843281-1844675
NCBI BlastP on this gene
wcaJ
M-antigen undecaprenyl disphosphate flippase
Accession: QHR26209
Location: 1844677-1846155
NCBI BlastP on this gene
wzxC
colanic acid biosynthesis pyruvyl transferase WcaK
Accession: QHR26210
Location: 1846335-1847615
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession: QHR26211
Location: 1847612-1848832
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession: QHR26212
Location: 1848843-1850237
NCBI BlastP on this gene
wcaM
UTP--glucose-1-phosphate uridylyltransferase GalF
Accession: QHR26213
Location: 1850412-1851305
NCBI BlastP on this gene
galF
dTDP-glucose 4,6-dehydratase
Accession: QHR26214
Location: 1851678-1852763

BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 610
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession: QHR26215
Location: 1852763-1853662

BlastP hit with rmlD
Percentage identity: 97 %
BlastP bit score: 605
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rfbD
glucose-1-phosphate thymidylyltransferase RfbA
Accession: QHR26216
Location: 1853720-1854598

BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 594
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rfbA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession: QHR26217
Location: 1854603-1855142

BlastP hit with rmlC
Percentage identity: 69 %
BlastP bit score: 243
Sequence coverage: 93 %
E-value: 2e-78

NCBI BlastP on this gene
rfbC
DUF616 domain-containing protein
Accession: QHR26218
Location: 1855129-1855905
NCBI BlastP on this gene
FNE81_08905
EpsG family protein
Accession: QHR26219
Location: 1855906-1856886
NCBI BlastP on this gene
FNE81_08910
glycosyltransferase
Accession: QHR26220
Location: 1856894-1857730
NCBI BlastP on this gene
FNE81_08915
glycosyltransferase
Accession: QHR26221
Location: 1857732-1858733
NCBI BlastP on this gene
FNE81_08920
glycosyltransferase family 2 protein
Accession: QHR26222
Location: 1858723-1859517
NCBI BlastP on this gene
FNE81_08925
NADP-dependent phosphogluconate dehydrogenase
Accession: QHR26223
Location: 1859631-1861037
NCBI BlastP on this gene
gndA
flippase
Accession: QHR26224
Location: 1861173-1862459
NCBI BlastP on this gene
FNE81_08935
45. : CP032892 Escherichia coli strain SCEC020022 chromosome     Total score: 5.5     Cumulative Blast bit score: 2052
colanic acid exporter
Accession: AYL90912
Location: 1861733-1863211
NCBI BlastP on this gene
C7V31_12110
colanic acid biosynthesis pyruvyl transferase WcaK
Accession: AYL90913
Location: 1863391-1864671
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession: AYL90914
Location: 1864668-1865888
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession: AYL90915
Location: 1865899-1867293
NCBI BlastP on this gene
wcaM
N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans, octacis-undecaprenol 4-epimerase
Accession: AYL90916
Location: 1867451-1868446
NCBI BlastP on this gene
C7V31_12130
UTP--glucose-1-phosphate uridylyltransferase
Accession: AYL90917
Location: 1868689-1869582
NCBI BlastP on this gene
C7V31_12135
hypothetical protein
Accession: AYL90918
Location: 1869619-1869882
NCBI BlastP on this gene
C7V31_12140
dTDP-glucose 4,6-dehydratase
Accession: AYL90919
Location: 1869954-1871039

BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 611
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession: AYL90920
Location: 1871039-1871938

BlastP hit with rmlD
Percentage identity: 95 %
BlastP bit score: 600
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
C7V31_12150
glucose-1-phosphate thymidylyltransferase RfbA
Accession: AYL90921
Location: 1871996-1872874

BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 596
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rfbA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession: AYL90922
Location: 1872879-1873427

BlastP hit with rmlC
Percentage identity: 66 %
BlastP bit score: 245
Sequence coverage: 100 %
E-value: 3e-79

NCBI BlastP on this gene
rfbC
oligosaccharide repeat unit polymerase
Accession: AYL90923
Location: 1873456-1874685
NCBI BlastP on this gene
C7V31_12165
hypothetical protein
Accession: AYL90924
Location: 1874678-1875841
NCBI BlastP on this gene
C7V31_12170
glycosyltransferase family 2 protein
Accession: AYL90925
Location: 1875838-1876656
NCBI BlastP on this gene
C7V31_12175
hypothetical protein
Accession: AYL90926
Location: 1876662-1877822
NCBI BlastP on this gene
C7V31_12180
glycosyltransferase family 2 protein
Accession: AYL93662
Location: 1877840-1878592
NCBI BlastP on this gene
C7V31_12185
NADP-dependent phosphogluconate dehydrogenase
Accession: AYL90927
Location: 1878694-1880100
NCBI BlastP on this gene
gndA
UDP-glucose 6-dehydrogenase
Accession: AYL90928
Location: 1880347-1881513
NCBI BlastP on this gene
C7V31_12195
46. : AP021896 Escherichia coli 2018.02.02CC DNA     Total score: 5.5     Cumulative Blast bit score: 2052
undecaprenyl-phosphate glucose phosphotransferase
Accession: BBP38141
Location: 1176852-1178246
NCBI BlastP on this gene
VEGS05_11450
lipopolysaccharide biosynthesis protein
Accession: BBP38140
Location: 1175372-1176850
NCBI BlastP on this gene
VEGS05_11440
colanic acid biosynthesis protein WcaK
Accession: BBP38139
Location: 1173816-1175096
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession: BBP38138
Location: 1172599-1173819
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession: BBP38137
Location: 1171194-1172588
NCBI BlastP on this gene
wcaM
UTP--glucose-1-phosphate uridylyltransferase
Accession: BBP38136
Location: 1170126-1171019
NCBI BlastP on this gene
galF
dTDP-glucose 4,6-dehydratase
Accession: BBP38135
Location: 1168669-1169754

BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 612
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rfbB
NAD(P)-dependent oxidoreductase
Accession: BBP38134
Location: 1167770-1168669

BlastP hit with rmlD
Percentage identity: 96 %
BlastP bit score: 601
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rfbD
glucose-1-phosphate thymidylyltransferase
Accession: BBP38133
Location: 1166834-1167712

BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 597
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession: BBP38132
Location: 1166296-1166829

BlastP hit with rmlC
Percentage identity: 67 %
BlastP bit score: 242
Sequence coverage: 96 %
E-value: 4e-78

NCBI BlastP on this gene
rfbC
teichoic acid transporter
Accession: BBP38131
Location: 1165022-1166269
NCBI BlastP on this gene
VEGS05_11350
UDP-N-acetyl glucosamine 2-epimerase
Accession: BBP38130
Location: 1163874-1165010
NCBI BlastP on this gene
VEGS05_11340
hypothetical protein
Accession: BBP38129
Location: 1162735-1163808
NCBI BlastP on this gene
VEGS05_11330
dTDP-rhamnosyl transferase RfbF
Accession: BBP38128
Location: 1160465-1161385
NCBI BlastP on this gene
rfbF
hypothetical protein
Accession: BBP38127
Location: 1159343-1160386
NCBI BlastP on this gene
VEGS05_11310
47. : LR134092 Escherichia coli strain NCTC10444 genome assembly, chromosome: 1.     Total score: 5.5     Cumulative Blast bit score: 2050
putative colanic biosynthesis UDP-glucose lipid carrier transferase
Accession: VDZ30733
Location: 1928656-1930050
NCBI BlastP on this gene
wcaJ
putative flippase (Putative export protein)
Accession: VDZ30734
Location: 1930052-1931530
NCBI BlastP on this gene
wzxC
Colanic acid biosynthesis protein
Accession: VDZ30735
Location: 1931602-1932882
NCBI BlastP on this gene
wcaK
putative colanic acid biosynthesis glycosyltransferase
Accession: VDZ30736
Location: 1932879-1934099
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein
Accession: VDZ30737
Location: 1934110-1935504
NCBI BlastP on this gene
wcaM
UTP--glucose-1-phosphate uridylyltransferase subunit GalF
Accession: VDZ30738
Location: 1935679-1936572
NCBI BlastP on this gene
galF
dTDP-D-glucose 4,6-dehydratase rmlB
Accession: VDZ30739
Location: 1936945-1938030

BlastP hit with rmlB
Percentage identity: 98 %
BlastP bit score: 613
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlB
dTDP-4-dehydrorhamnose reductase
Accession: VDZ30740
Location: 1938030-1938929

BlastP hit with rmlD
Percentage identity: 98 %
BlastP bit score: 608
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlD
glucose-1-phosphate thymidylyltransferase
Accession: VDZ30741
Location: 1938987-1939865

BlastP hit with rmlA
Percentage identity: 97 %
BlastP bit score: 592
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rfbA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession: VDZ30742
Location: 1939870-1940418

BlastP hit with rmlC
Percentage identity: 66 %
BlastP bit score: 237
Sequence coverage: 100 %
E-value: 4e-76

NCBI BlastP on this gene
rfbC
Uncharacterised protein
Accession: VDZ30743
Location: 1940425-1941498
NCBI BlastP on this gene
NCTC10444_01851
O-acetyltransferase
Accession: VDZ30744
Location: 1941491-1942222
NCBI BlastP on this gene
wbiO
O-antigen flippase
Accession: VDZ30745
Location: 1942215-1943702
NCBI BlastP on this gene
wzx
IS1 InsA protein
Accession: VDZ30746
Location: 1943762-1944034
NCBI BlastP on this gene
insA_3
IS1, transposase orfB
Accession: VDZ30747
Location: 1944061-1944456
NCBI BlastP on this gene
NCTC10444_01855
Uncharacterised protein
Accession: VDZ30748
Location: 1944510-1945577
NCBI BlastP on this gene
NCTC10444_01856
glycosyl transferase in colanic acid biosynthesis
Accession: VDZ30749
Location: 1945574-1946500
NCBI BlastP on this gene
kfoC
galactoside O-acetyltransferase
Accession: VDZ30750
Location: 1946487-1947047
NCBI BlastP on this gene
lacA_1
glycoside hydrolase family protein
Accession: VDZ30751
Location: 1947049-1948242
NCBI BlastP on this gene
NCTC10444_01859
48. : GU068041 Escherichia coli strain W27 serogroup O115 O antigen gene cluster     Total score: 5.5     Cumulative Blast bit score: 2050
RmlB
Accession: ADN43831
Location: 108-1193

BlastP hit with rmlB
Percentage identity: 98 %
BlastP bit score: 613
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlB
RmlD
Accession: ADN43832
Location: 1193-2092

BlastP hit with rmlD
Percentage identity: 98 %
BlastP bit score: 608
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlD
RmlA
Accession: ADN43833
Location: 2150-3028

BlastP hit with rmlA
Percentage identity: 97 %
BlastP bit score: 592
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlA
RmlC
Accession: ADN43834
Location: 3033-3581

BlastP hit with rmlC
Percentage identity: 66 %
BlastP bit score: 237
Sequence coverage: 100 %
E-value: 4e-76

NCBI BlastP on this gene
rmlC
WegG
Accession: ADN43835
Location: 3588-4661
NCBI BlastP on this gene
wegG
WegH
Accession: ADN43836
Location: 4654-5385
NCBI BlastP on this gene
wegH
Wzx
Accession: ADN43837
Location: 5378-6865
NCBI BlastP on this gene
wzx
Wzy
Accession: ADN43838
Location: 7673-8740
NCBI BlastP on this gene
wzy
WegI
Accession: ADN43839
Location: 8737-9663
NCBI BlastP on this gene
wegI
WegJ
Accession: ADN43840
Location: 9650-10210
NCBI BlastP on this gene
wegJ
WegK
Accession: ADN43841
Location: 10212-11405
NCBI BlastP on this gene
wegK
49. : EU289392 Escherichia coli serogroup O53 O-antigen gene cluster     Total score: 5.5     Cumulative Blast bit score: 2050
RmlB
Accession: ABZ79713
Location: 108-1193

BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 612
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlB
RmlD
Accession: ABZ79714
Location: 1193-2092

BlastP hit with rmlD
Percentage identity: 97 %
BlastP bit score: 605
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlD
RmlA
Accession: ABZ79715
Location: 2150-3028

BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 595
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rmlA
RmlC
Accession: ABZ79716
Location: 3033-3602

BlastP hit with rmlC
Percentage identity: 66 %
BlastP bit score: 238
Sequence coverage: 96 %
E-value: 3e-76

NCBI BlastP on this gene
rmlC
WbdE
Accession: ABZ79717
Location: 3589-4431
NCBI BlastP on this gene
wbdE
WbdF
Accession: ABZ79718
Location: 4428-5540
NCBI BlastP on this gene
wbdF
Wzx
Accession: ABZ79719
Location: 5521-6750
NCBI BlastP on this gene
wzx
WbdG
Accession: ABZ79720
Location: 6751-7845
NCBI BlastP on this gene
wbdG
Wzy
Accession: ABZ79721
Location: 7849-9141
NCBI BlastP on this gene
wzy
WbdS
Accession: ABZ79722
Location: 9134-10189
NCBI BlastP on this gene
wbdS
50. : CP041520 Escherichia coli strain 3057 chromosome.     Total score: 5.5     Cumulative Blast bit score: 2050
M-antigen undecaprenyl disphosphate flippase
Accession: QDN48013
Location: 4401641-4403119
NCBI BlastP on this gene
wzxC
colanic acid biosynthesis pyruvyl transferase WcaK
Accession: QDN48012
Location: 4399989-4401269
NCBI BlastP on this gene
wcaK
colanic acid biosynthesis glycosyltransferase WcaL
Accession: QDN48011
Location: 4398772-4399992
NCBI BlastP on this gene
wcaL
colanic acid biosynthesis protein WcaM
Accession: QDN48010
Location: 4397367-4398761
NCBI BlastP on this gene
wcaM
UTP--glucose-1-phosphate uridylyltransferase GalF
Accession: QDN48009
Location: 4396299-4397192
NCBI BlastP on this gene
galF
dTDP-glucose 4,6-dehydratase
Accession: QDN48008
Location: 4394841-4395926

BlastP hit with rmlB
Percentage identity: 97 %
BlastP bit score: 612
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rfbB
dTDP-4-dehydrorhamnose reductase
Accession: QDN48007
Location: 4393942-4394841

BlastP hit with rmlD
Percentage identity: 97 %
BlastP bit score: 605
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rfbD
glucose-1-phosphate thymidylyltransferase RfbA
Accession: QDN48006
Location: 4393006-4393884

BlastP hit with rmlA
Percentage identity: 98 %
BlastP bit score: 595
Sequence coverage: 100 %
E-value: 0.0

NCBI BlastP on this gene
rfbA
dTDP-4-dehydrorhamnose 3,5-epimerase
Accession: QDN48005
Location: 4392432-4393001

BlastP hit with rmlC
Percentage identity: 66 %
BlastP bit score: 238
Sequence coverage: 96 %
E-value: 3e-76

NCBI BlastP on this gene
rfbC
hypothetical protein
Accession: QDN48004
Location: 4391603-4392445
NCBI BlastP on this gene
FNJ66_21090
glycosyltransferase family 1 protein
Accession: QDN48003
Location: 4390494-4391606
NCBI BlastP on this gene
FNJ66_21085
O53 family O-antigen flippase
Accession: QDN48002
Location: 4389284-4390513
NCBI BlastP on this gene
wzx
glycosyltransferase family 4 protein
Accession: QDN48001
Location: 4388189-4389283
NCBI BlastP on this gene
FNJ66_21075
O53 family O-antigen polymerase
Accession: QDN48000
Location: 4386893-4388185
NCBI BlastP on this gene
wzy
glycosyltransferase family 1 protein
Accession: QDN47999
Location: 4385845-4386900
NCBI BlastP on this gene
FNJ66_21065
NADP-dependent phosphogluconate dehydrogenase
Accession: QDN47998
Location: 4384311-4385717
NCBI BlastP on this gene
gndA
         
Detecting sequence homology at the gene cluster level with MultiGeneBlast.
Marnix H. Medema, Rainer Breitling & Eriko Takano (2013)
Molecular Biology and Evolution , 30: 1218-1223.